Microlunatus sp. Gsoil 973: GJV80_13650
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Entry
GJV80_13650 CDS
T06297
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
micg
Microlunatus sp. Gsoil 973
Pathway
micg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJV80_13650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micg03019
]
GJV80_13650
03400 DNA repair and recombination proteins [BR:
micg03400
]
GJV80_13650
Enzymes [BR:
micg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJV80_13650
Messenger RNA biogenesis [BR:
micg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GJV80_13650
DNA repair and recombination proteins [BR:
micg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GJV80_13650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DprA_WH
Tox-PL-2
HEM4
Motif
Other DBs
NCBI-ProteinID:
QGN33682
UniProt:
A0A6I5VK66
LinkDB
All DBs
Position
complement(2902751..2904838)
Genome browser
AA seq
695 aa
AA seq
DB search
MAGMAGTATQTAEILDRTIRAVAGPQARAREDQARAVTALVDEHKRVLVVQATGWGKSAV
YWGATAALRAGGAGPTLVVSPLLALMRDQISAAERAGLRAATINSTNVDDWESIFSDLDA
DRLDVLLVSPERLGNPRFADRLPRLLSRCGLLVIDEAHCVSDWGFDFRPDYQRLTRALLA
LAPQTPVLATTATANQRVTADVARQLGTDTVTFRGSLARSSLRLAVVPELAPLERYAWVA
EALCALPGSGIVYVLTVAEADRVAAFLNQYLAEQGLAGQRQQVAAYTGQTENRTELEDQL
RDNRIKALVATSALGMGYDKPDLAFCIHLGSPASPVAYYQQVGRAGRALDEAVAVLVPSV
SDERIWEYFATAGIPDPDQVDRVLEVVGDEPQSEAAISTATGVRPGRLSTLLKILATDDA
VDKVPGGWLATGKGWTYDDGKWSELRRVRAAEADLMRHYAHGDGCLMQFLQQALDDPDPS
PCGRCSVCTGDLPAPGPRPDPDTVRAAQHFFRGLDVVIEPRKLWPSRIDGVKGKINFLAE
GRAIAYADDPAWQQTLATLWQRDAVAPREVLDGAVEVLKRWSRGWQRPVAVVPMPSRRFP
ILINSIAGHLGQVGRLPVVDALGIVGRRPTDDATSATRVRELLDGLALRQGVAFDGAVLL
VDDTIRTRWTLTVAGKLITDAGATTVLPFAVHQLP
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatggccggcaccgcaacgcagaccgcagagatcctcgaccgcacgatccgg
gcggtcgcgggtccacaggcacgagcgcgcgaggaccaggcgcgcgcggtcactgcgctg
gtcgacgagcacaagcgtgtgctggtggtgcaggcgactggttggggcaagtcggccgtc
tactggggcgcgactgcggcgttgcgcgccggcggtgccgggccgacgctggtcgtctca
cccctgctggccctgatgcgcgaccagatctcggccgcggagcgtgcgggtctgcgggcg
gcgaccatcaattcgaccaatgtcgacgactgggagtcgatcttctccgatctcgacgcc
gaccggttggacgtgctgttggtctcaccggagcggctgggcaatccccggttcgccgac
cggctgccccgactcctctcccgctgcggtctgctagtcatcgacgaggcacattgtgtc
tcggactggggattcgacttccgtccggactaccagcggctgaccagggcactgctggcg
ctggcgccccagacgcccgtcctggccaccacagcgaccgccaaccagcgggtcaccgcc
gacgtggcccggcagctcggcacggacaccgtcacgttccgcggctcgctggccaggtcg
tccctgcggttggccgtggtgccggagttggcgccgctcgaacggtacgcctgggtcgcc
gaggcgctgtgcgcgctgccgggttccggcatcgtgtacgtgttgaccgttgccgaggcg
gaccgcgtcgcggccttcctgaaccagtacctggccgaacagggtcttgccggtcagcgt
cagcaggtcgcggcgtacaccggacagaccgagaaccgtactgagctcgaagatcaactt
cgggacaacaggatcaaggcgctggttgccacgtccgcgctcggcatggggtacgacaaa
cccgatcttgcgttctgcatccatctgggttcacccgcctcgccggtcgcctactaccaa
caggtcggacgcgccggccgggcactcgacgaggcggttgccgtgctcgtgccgtcggtc
tccgacgagcgaatctgggaatacttcgccaccgcagggatcccggaccccgatcaggtc
gatcgggtgctggaggtggtcggcgacgaaccgcagtcggaggccgcgatcagcaccgcg
accggggtccggccgggccggttgtcgaccctgctgaagatcctcgccaccgacgacgcc
gtggacaaggtgcccggtggctggctcgcgaccggaaagggctggacctacgacgacggc
aaatggtccgaactgcgccgggtccgggccgcggaggccgatctgatgcgccattacgcc
cacggtgacgggtgcctgatgcagttcctgcagcaggccctcgacgacccggatccgtca
ccgtgcggccggtgttcggtctgtaccggtgacttgcccgcgccgggtccgcgccccgac
ccggacaccgtacgtgccgcccagcacttcttccgcgggctggatgtggtgatcgaacca
cgcaagctctggccgtccaggatcgatggcgtcaaggggaagatcaacttcctggccgag
ggccgggcgatcgcgtacgccgacgacccggcctggcagcagacattggcaaccctctgg
cagcgggatgctgtggcaccgcgggaggtcctggacggagccgtcgaggtgctgaaacgc
tggtcacgcggctggcagcggccggtcgccgtcgtcccgatgccgtcccggcggttcccg
atcttgatcaattcgatcgccggtcacctgggtcaggtgggacggttgccggttgtcgac
gccctggggatcgtcggccgccgtccgaccgacgacgcgacctcggccacccgggtccgc
gagctgctcgacggtctggctcttcggcagggcgtcgccttcgacggcgcggtgttgctg
gtcgacgacaccatccggacccgctggacactgaccgtcgccgggaagttgatcaccgac
gccggggcgaccactgtgttgccgttcgccgtccatcagctgccgtga
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