Microbacterium sp. 1.5R: BMW26_03830
Help
Entry
BMW26_03830 CDS
T04912
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
micr
Microbacterium sp. 1.5R
Pathway
micr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
micr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMW26_03830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micr03021
]
BMW26_03830
03400 DNA repair and recombination proteins [BR:
micr03400
]
BMW26_03830
Enzymes [BR:
micr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMW26_03830
Transcription machinery [BR:
micr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMW26_03830
DNA repair and recombination proteins [BR:
micr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMW26_03830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
APH44190
LinkDB
All DBs
Position
818860..822363
Genome browser
AA seq
1167 aa
AA seq
DB search
MAAARNASTSTTTKNGRGASRLSFAKISDTLTVPDLLALQTESFGWLVGNDAWKARVAEA
KKAGRTDVNENSGLGEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIEECKERGKTYAAP
LYVEAEFMNHLTGEIKTQTVFMGDFPLQTDKGTFIINGSERVVVSQLVRSPGVYFDKTPD
KTSDKDIVSARVIPSRGAWLEFEIDKRDQVGVRVDRKRKQSVTVFLKALGMTSEEILTEF
AGYTSIEETLAKDTIVTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVG
RYKINHKLGLDAPLTDSVLTVQDIVATIKYLVRLHAGTEETFPGIRSGKKADIRIATDDI
DNFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEF
FGTSQLSQFMDQNNPLAGLTNKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCPIETPE
GPNIGLIGALATFARINSFGFIETPYRKVEGGVVTEHIDYLTASEEVDFNIAQANAPLDK
NGRFRESHVLARPKGGSGEVDLFLPEEIGYIDVSPRQMVSVATSLVPFLEHDDAQRALMG
ANMQRQAVPLLRSDSPLVGTGMEGYTAIDAGDVLTAEKPGVVTEVSADRVTVMLDEGGTQ
DYHLRKFDRSNQGTSYNQKVVVNEGDRVEVGEVIADGPATENGELALGKNLLVAFMTWEG
YNFEDAIILSQDLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLKDLDERG
IIRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTII
AVKEFNAEDGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVIAKILPIEDMPFL
ADGTPVDIVLNPLGIPGRMNFGQVLETHLGWIAKQGWKVEGTPEWAARLPKDAFEAAPGT
KVATPVFDGASEEEISGLLDATTPTRDGIRLIDSTGKTQLFDGRSGEPFPAPISVGYMYI
LKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLT
IKSDDILGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTLVNLRDT
DDEAFRAAEELGINISSRFEAASIDEI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgctcgcaacgcatccacatccaccaccaccaagaacggacgcggagcttcc
cgtctttcgttcgccaagatctccgacacgctgacggtccctgaccttctcgctctgcag
acggaatccttcggatggctcgtcggcaacgacgcctggaaggctcgagtcgcagaggcc
aagaaggccggccgcaccgacgtgaacgagaacagcggtctcggcgagatcttcgaggag
atctctccgatcgaggacctcggcgagacgatgcagctgtcgttcaccaacccttacctc
gagccggagaagtactcgatcgaggagtgcaaggagcgcggcaagacgtacgccgctccg
ctgtacgtcgaggccgagttcatgaaccacctcacgggtgagatcaagacccagacggtc
ttcatgggcgacttcccgctgcagaccgacaagggaacgttcatcatcaacggctccgag
cgcgtcgtcgtctcgcagctcgtgcgttcgcccggtgtgtacttcgacaagacccccgac
aagacgtccgacaaggacatcgtgtcggctcgcgtcatcccgagccgtggtgcatggctc
gagttcgagatcgacaagcgcgaccaggtcggcgtgcgcgtcgaccgcaagcgcaagcag
tcggtcaccgtgttcctcaaggcgctgggcatgaccagcgaggagatcctcacggagttc
gccggctacacctcgatcgaggagacgctcgcgaaggacacgatcgtcacgaaggaagat
gcgctccgcgacatctaccgcaagctgcgtccgggcgagcaggtcgccgccgaggccgcc
cgcgcgctcctcgacaacttctacttcaacccgaagcgctacgacctcgcgaaggtgggt
cgttacaagatcaaccacaagctcggtctcgacgctccgctgaccgactcggtcctcacg
gttcaggacatcgtcgcgacgatcaagtacctcgtgcgtctgcacgcaggcaccgaagag
accttccccggcatccgctcgggcaagaaggccgacatccgcatcgcgaccgatgacatc
gacaacttcggcaaccgtcgcatccgcgcggtcggcgagctgatccagaaccaggtccgc
accggtctgtcccgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacatcgag
gcgatcacgccgcagaccctgatcaacgtgcgccccgtcgtcgccgcgatcaaggagttc
ttcggaacctcgcagctgtcgcagttcatggaccagaacaacccgctcgcgggtctgacc
aacaagcgccgcctctcggctctcggccccggtggtctgagccgtgaccgcgcaggcgtc
gaggtccgtgacgtccacccgtcgcactacggccgcatgtgccccatcgagacccctgaa
ggcccgaacatcggtctgatcggtgctctcgcgacgttcgcgcgcatcaactcgttcggt
ttcatcgagaccccgtaccgcaaggtcgagggtggcgtcgtcaccgagcacatcgattac
ctgaccgcttccgaagaggtcgacttcaacatcgcgcaggcgaacgccccgctcgacaag
aacggtcgcttccgcgagagccacgtcctcgcgcgccccaagggcggtagcggtgaggtg
gacctcttccttccggaggagatcggctacatcgacgtctcgccgcgccagatggtgtcg
gtcgcgacctcgctcgtgcccttcctcgagcacgacgacgcacagcgcgcactcatgggc
gccaacatgcagcgtcaggctgtgccgctgctccgcagcgactcgccgctcgtcggaacc
ggtatggagggctacacggccatcgacgccggcgacgtgctcacggctgagaagccgggt
gtcgtcaccgaggtctccgcagaccgcgtcaccgtcatgctcgacgagggtggaacgcag
gactaccacctgcgcaagttcgaccgctcgaaccagggcacgtcgtacaaccagaaggtc
gtcgtcaacgagggcgaccgcgtcgaggtcggagaggtcatcgccgatggccccgccacc
gagaacggcgaactggcactcggaaagaacctcctcgtcgcgttcatgacgtgggagggc
tacaacttcgaggacgcgatcatcctgagccaggacctggtcaaggacgacaccctctcc
tcgatccacatcgaggagtacgaggtcgacgcgcgcgacacgaagctcggcaaggaggag
atcacccgtgacctccccaacgtcagccccgagctcctgaaggatctcgacgagcgcggc
atcatccgcatcggtgccgaggtccgccccggcgacatcctcgtcggcaaggtcacgccg
aagggcgagaccgagctgtcggcggaagagcgtctgctccgcgcgatcttcaacgagaag
agccgcgaagtccgtgacacctctctcaaggtgccccacggcgagcagggcacgatcatc
gccgtcaaggagttcaacgccgaggacggcgacgacgagctcggctccggtgtcaaccgc
cgcgtcgtggtctacatcgcccagaagcgcaagatcaccgagggtgacaagctcgccggt
cgtcacggcaacaagggtgtcatcgccaagatcctcccgatcgaggacatgccgttcctc
gcggacggaaccccggtcgacatcgtcctgaacccgctgggcatccccggtcgaatgaac
ttcggccaggtgctcgagacccacctcgggtggatcgcgaagcagggctggaaggtcgaa
ggcaccccggagtgggctgcgcgactccccaaggacgcgttcgaggctgcccccggcacc
aaggtcgcgaccccggtgttcgacggtgcgagcgaggaggagatctccggtctcctcgac
gcgaccaccccgacccgtgacggcatccgcctgatcgactcgaccggaaagacgcagctg
ttcgacggccgctccggtgagccgttcccggcgccgatctcggtgggctacatgtacatc
ctgaagctgcaccacctggtcgacgacaagatccacgcacgttcgacgggtccgtactcg
atgatcacccagcagccgctcggtggtaaggcgcagttcggtggccagcgattcggtgag
atggaggtgtgggccctcgaggcctacggcgccgcatacgcgctccaggagctcctcacg
atcaagtccgacgacatcctcggccgcgtcaaggtgtacgaggcgatcgtcaagggcgag
aacatccaggagcccggcatccccgagtccttcaaggtgctcatgaaggagatgcagtcg
ctctgcctgaacgtcgaggtcctctcggcagacggcacgctcgtcaacctgcgtgacacc
gacgacgaggccttccgcgctgcggaggaactcggcatcaacatctccagccgcttcgag
gccgcctcgatcgacgagatctaa
DBGET
integrated database retrieval system
