Micromonospora sp. L5: ML5_2385
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Entry
ML5_2385 CDS
T01379
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mil
Micromonospora sp. L5
Pathway
mil03030
DNA replication
mil03430
Mismatch repair
mil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ML5_2385
03430 Mismatch repair
ML5_2385
03440 Homologous recombination
ML5_2385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mil03032
]
ML5_2385
03400 DNA repair and recombination proteins [BR:
mil03400
]
ML5_2385
Enzymes [BR:
mil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ML5_2385
DNA replication proteins [BR:
mil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ML5_2385
DNA repair and recombination proteins [BR:
mil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ML5_2385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ADU07907
LinkDB
All DBs
Position
2475896..2479429
Genome browser
AA seq
1177 aa
AA seq
DB search
MGDSFAHLHVHTEYSMLDGAARLKDLFAEAARLGMPAVAITDHGNMHGANDFYKQAMDAG
VKPILGVEAYVAPESRFHKARVKWGRPEQKSDDVSGNGAITHMTMWAANRDGLHNLFKLN
SRASMEGHYVKWPRMDMELIAEHAEGIMATTGCPSGAVQTRLRLGQFDEALKVAAAYQDI
FGKDNYFLEIMDHGLDIERRVRDGLTEIARKLDIPPVVTNDSHYTHEAQAEAHDVLLCVQ
TGSNVADPNRFRFEGGGYFVKSADQMRAVDSSELWQQGCRNTLLVAEKVDPAGMFTFHNL
MPRFPIPEGETEESWFRKETFAGLARRFPGGIPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKSQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGFPYAVGDRITKAMPP
AVMGKDIPLSGIFDPKHPRYAEAGEIRGLYESDPDVKKVIETAKGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGRELDLLGLPLDDRQAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLREILAPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFIPFRDGCRERGYSDEAIQAVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMALYLSECRRMRIQVLPPDVNTSA
GPFTPVGKEIRFGLGAVRNVGANVVASIMRCREEKGDYTDFYDFLSKVDAVVCNKKTIES
LIKAGAFDSLQHPRKGLLAVHADAIDAYADVKRKEAVGQYDLFGAGFGEADTGGSTTVMP
VIGEGEWDKRDKLAFEREMLGLYVSDHPLFGLEHVLGAAADTTIAALSEEGTVPDGAVVT
LAGILSGVQRRVTKQGRAWASATLEDLAGGVETLFFPNTYEVIGQYIAEDAIVVVKGRVD
RRDDTPRIMAMDMSMPDVSSTPGSKPITLTIPVHRCTPPLVERLKETLVLHPGDTEVHVK
LLNGGKVTTLRLGPFRVAPTTALMGDLKSVLGPANVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcgttcgcgcatctgcacgtacacaccgagtactcgatgctcgacggggcg
gcccggctcaaggacctcttcgccgaggcggcgcggctcggcatgccggcggtggcgatc
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggacgccggg
gtcaagcccatcctcggcgtcgaggcgtacgtcgcgccggagtcgcgcttccacaaggcc
cgggtcaagtgggggcgccccgagcagaagagcgacgacgtctccggtaacggcgcgatc
acccacatgaccatgtgggcggccaaccgcgacggcctgcacaacctgttcaagctcaac
tcccgcgcctccatggagggccactacgtgaagtggccccggatggacatggagctgatc
gccgagcacgccgagggcatcatggccaccaccggctgcccgtccggcgcggtgcagacc
cggctgcggctgggccagttcgacgaggcgctcaaggtcgcggccgcataccaggacatc
ttcggcaaggacaactacttcctggagatcatggaccacggcctcgacatcgagcgccgg
gtccgcgacgggctcaccgagatcgcccgcaagctcgacatcccgccggtggtcaccaac
gactcgcactacacacacgaggcgcaggccgaggcgcacgacgtgctgctctgcgtccag
accggcagcaacgtggccgaccccaaccggttccggttcgagggcggcggctacttcgtc
aagtccgccgaccagatgcgcgccgtcgactcctccgagctgtggcagcagggctgccgc
aacacgctgctggtcgccgagaaggtcgacccggccggcatgttcacgttccacaacctg
atgccgcggttcccgatccccgagggcgagaccgaggaatcctggttccgcaaggagacc
ttcgccggcctggcgcgccgcttccccggcggcatccccgagggccacgtcgtccaggcc
gagtacgagctgggcgtcatcatccagatgggcttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtgggccaagagccagggcatcgcggtcggcccggggcgcggctcggcg
gccggctcgctcgtggcgtacgcgctgggcatcaccgacctcgacccgatcccgcacggc
ctgatcttcgagcggttcctcaaccccgaacgcgtctccatgcccgatgtcgacatcgac
ttcgacgagcgccggcgcggtgaggtcatcaaatacgtgaccgacaagtggggcgaggac
aaggtcgcgcagatcgccacgttcggcacgatcaaggcgaaggccgcgatcaaggactcg
gcccgcgtgctcggcttcccgtacgcggtcggcgaccggatcaccaaggccatgcccccg
gcggtgatgggcaaggacatcccgctgtccggcatcttcgacccgaagcacccgcgctac
gccgaggcgggcgagatccggggcctctacgagtccgacccggacgtcaagaaggtcatc
gagaccgccaagggcatcgagggcttgatccggcagaccggtgtgcacgccgccggcgtc
atcatgtccgccgaaccgatcatcgagcacatcccgctgatgcggcgcgactccgacggc
gtcatcatcacgcagttcgactacccgacctgcgagtcgctcgggctgctgaagatggac
ttcctcggcctgcggaatctgacgatcatcgacgacgcggtgaagaacatccagctcaac
cacggccgggagctggacctgctcggcctgccgcttgacgacaggcaggcgtacgagctg
ctggcccgcggtgacacgctcggcgtgttccagctcgacggcgggccgatgcgctcgctg
ctgcggctgatgaagccggacaacttcgaggacatctccgccgtcctggcgctctaccgg
cccggcccgatgggcgttgactcgcacaccaactacgcgctgcgcaagaacgggctccag
gagatcaccccgatccacccggagctggaggagccgctgcgcgagatcctcgcacccacg
tacggcctgatcgtctaccaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
acgctcggccaggccgacctgctgcgccgggcgatgggcaagaagaagaaggagatcctc
gacaaggagttcatcccgttccgggacggctgccgcgagcgcggctactccgacgaggcc
atccaggccgtgtgggacgtgctggtcccgttcgccggttacgcgttcaacaaggcccac
tccgccgcgtacggcctggtctcctactggaccgcgtacctcaaggcgcactacccggcc
gagtacatggccgcgctgctcacctccgtcggtgacgacaaggacaagatggccctgtac
ctgtccgagtgccgccggatgcgcatccaggtgctcccgccggacgtgaacacctcggcc
gggccgttcaccccggtcggcaaggagatccgcttcggtctcggcgcggtacgcaacgtc
ggtgcgaacgtggtcgcctcgatcatgcggtgccgcgaggagaagggcgactacaccgac
ttctacgacttcctgtccaaggtcgacgccgtcgtctgcaacaagaagaccatcgaatcg
ctgatcaaggccggggcgttcgactcgctccagcatccgcgcaagggcctgctggcggtg
cacgccgacgccatcgacgcgtacgccgacgtcaagcgcaaggaggcggtcggccagtac
gacctgttcggcgccggattcggcgaggcggacaccggtggcagcaccactgtcatgccg
gtcatcggcgagggggagtgggacaagcgcgacaagctcgcgttcgagcgcgagatgctc
ggcctgtacgtctccgaccacccgctcttcggtctggagcacgtgctcggcgctgcggcg
gacaccacgatcgccgcgctgtccgaggagggcactgtgcccgacggcgcggtggtcacg
ctggccggcatcctctccggcgtgcagcgccgggtcaccaagcagggccgggcctgggcc
tcggccactctcgaagacctcgccggcggcgtggagacgctgttcttcccgaacacgtac
gaggtgatcgggcagtacatcgccgaggacgcgatcgtggtggtgaagggccgggtggac
cggcgcgacgacaccccgcgcatcatggcgatggacatgtccatgccggacgtcagcagc
accccggggagcaagccgatcacgctcaccatccctgtgcaccgctgcacgccgccgctc
gtggaacggctcaaggagacgctggtgctgcaccccggcgacaccgaggtgcacgtcaag
ctgctcaacggcggcaaggtcaccacgctgcgcctcggcccgttccgggtcgcgccgacc
acagcgctgatgggtgacctgaagagcgtgctcggcccggccaacgtgagctga
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