Mycobacterium paraintracellulare: OCQ_50160
Help
Entry
OCQ_50160 CDS
T01755
Name
(GenBank) RNA polymerase factor sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mir
Mycobacterium paraintracellulare
Brite
KEGG Orthology (KO) [BR:
mir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mir03021
]
OCQ_50160
Transcription machinery [BR:
mir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCQ_50160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
SnoaL_4
Sigma70_r4
NTF2
SnoaL_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AFC56527
LinkDB
All DBs
Position
5253058..5254065
Genome browser
AA seq
335 aa
AA seq
DB search
MSLLAQDPEGDAVLGTDFSAQAEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKSYDR
FEGKSSLRTWLHRIATNTCLSALEGKGRRALPVGLGAPSSDPTAELVERREVPWLEPLPE
LTDHPADPSVVVGSRESVRLAFVAALQYLPPRQRAVLLLRDVLQWRSAEVAEAVGTTTTA
VNSLLQRARSQLDAVGPSADDQLAPPDSPEAQDLLARYIAAFETYDIDRLVELFTAEAIW
EMPPYAGWYRGAADIVTLIHQQCPAEAGGDMRLLPLVANGQLAAAMYMRAGDVHVPFQLH
VLDVHGEKVSHVVAFLDETLFTKFGLPGSLSAGQE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcttctcgcccaagaccccgaaggcgacgcggtgctggggaccgatttctcggcc
caggccgagccctatcgccgcgagctgctcgcccactgctatcgaatgaccgggtcgctg
cacgacgccgaagatctggtgcaggagacgttgctgcgggcctggaagtcctacgaccgt
ttcgaaggcaagtcctcgctgcggacctggctgcaccgcatcgccaccaacacctgcctg
agcgcgctggagggcaaggggcgcagggcgttgccggtgggcctgggcgccccgagctcg
gacccgaccgcggagctggtggagcgccgcgaagtgccctggctcgagccgctgccggag
ttgaccgatcacccggcggacccgtcggtggtcgtcgggtcgcgggagtcggtacggctg
gcgttcgtggctgcgctgcaataccttccgccgcggcagcgggcggtgctgctgctgcgc
gacgtgctgcagtggcgctccgccgaggtcgccgaggcggtcggcaccaccacgaccgcc
gtcaacagcctgctgcagcgggcccggtcgcaactggatgccgtcggtcccagcgccgac
gaccaactggcgccgccggattcgcccgaggcccaagacctgctggcccgctacatcgcc
gcgttcgagacctacgacatcgaccgcctggtggagttgttcaccgcggaggcgatctgg
gaaatgccgccgtacgccggctggtatcggggcgcggcggacatcgtgaccctgatccac
cagcaatgcccggccgaggcgggcggagacatgcggctgctgccgctggtcgccaacggt
cagctcgccgccgcgatgtacatgcgcgccggcgacgtgcatgtccccttccagttgcat
gtgctggatgtgcacggcgagaaggtgtctcacgtggtggcgttcctcgatgagacgttg
ttcacgaagttcgggctgcccggttcactgtccgccggtcaggagtaa
DBGET
integrated database retrieval system
