Microvirga sp. 17 mud 1-3: C4E04_17020
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Entry
C4E04_17020 CDS
T05470
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miv03021
]
C4E04_17020 (rpoH)
Transcription machinery [BR:
miv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4E04_17020 (rpoH)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
KORA
Sigma70_r3
GntR
Motif
Other DBs
NCBI-ProteinID:
AWM88276
UniProt:
A0A2Z3IC68
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All DBs
Position
3619782..3620669
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AA seq
295 aa
AA seq
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MAAALPVLANEGGLSRYLDEIRRFPMLEPHEEYMLAKRWREHGDREAAHKLVTSHLRLVA
KIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKAAIQEYILRSWS
LVKMGTTANQKKLFFNLRKAKGRISALDEGDLHPDQVKQIATQLGVNEQDVVDMNRRLGG
DASLNAPLREEGEGEWQDWLVDNSESQEQLLVKEEEGQNRLSALRSALSVLNPRERRIFE
ARRLSDDPITLEELSTEFGVSRERVRQIEVRAFEKVQEAVKKNLARIEAPTEEAH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcgcttccagtgcttgccaatgaagggggcctttcgcgctatctcgacgag
atccgccgattccccatgctcgagccgcatgaggaatacatgctcgccaagcgctggcgc
gagcatggcgaccgcgaagccgctcacaagctcgtaacatcccacctgcgtctcgtggcg
aagatcgccatgggataccgcggctacggcctgccgatcagcgaagtcgtgtccgaaggc
aatgtcggcctgatgcaggccgtcaagcgcttcgagcccgagaaaggcttccgcctcgcc
acatatgccatgtggtggatcaaagccgcgattcaagaatacatcctgcgttcctggtcc
ctcgtgaagatgggcaccacggcgaaccagaagaagctgttcttcaacctgcgcaaggcc
aagggccgcatctcggccctggacgagggtgacctgcatcccgaccaggtgaagcagatc
gccacccagctcggcgtcaacgagcaggacgtggtggatatgaaccgccgcctcggcggc
gatgcctccctcaacgctcccttgcgcgaggaaggcgaaggcgagtggcaggactggctc
gtggacaacagcgagagccaggagcagctgcttgtgaaggaagaagagggccagaaccgg
ctctcggccctgcgcagcgcgctctcggtgctcaatccccgcgagcgtcgcatcttcgag
gcccggcgcctgtccgacgacccgatcaccctggaagagctgtcgaccgagttcggcgtc
tctcgggagcgtgtgcgccagatcgaggtgcgcgccttcgagaaggttcaggaagccgtg
aagaagaacctggccaggatcgaggcgcccaccgaggaggcgcactga
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