Methylocystis iwaonis: SS37A_14960
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Entry
SS37A_14960 CDS
T09113
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
miwa
Methylocystis iwaonis
Pathway
miwa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SS37A_14960 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miwa03400
]
SS37A_14960 (ku)
DNA repair and recombination proteins [BR:
miwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SS37A_14960 (ku)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BDV33967
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All DBs
Position
1584705..1585622
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AA seq
305 aa
AA seq
DB search
MAESARTFWKGYLRLALVSIPVRLVAAEKAESEIRFHQVDRNSKQRIRYLKVAPGKGEVK
KEDIVLGYEVEPGNYVFMEDEELDSLKLSTRHTIDLLQFVDAEEIEPLYFNRPYYVLPDG
EVAEEGYRVLRDALWAKHKVGIGQLTLRGREHLVALFPMGEGQGLVLDTLRYDSELKNAD
DIFSAIGREKPREDMVQMAEDLIERRSEPFDPAKFRNHYAEALRELVKAKLGRGETVPVE
EQVEPGAKVLDFMEALKRSVAASGGGEAPPEPPKKGKRAAAPPAKKPPAAKSSKAAKAPA
RRRAG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtcggcgcgcacattctggaagggctatttgcgtctggcccttgtctccatt
cccgtccggctggtggcggcggaaaaggccgagtcggaaatccgcttccaccaggtcgac
cgcaactccaagcaacgcatccgctacctcaaggtcgcgccgggcaaaggcgaggtcaag
aaggaggacatcgtcctcggttacgaggtcgagccgggaaattacgtcttcatggaagat
gaggagctcgactcgctgaagctgtcaacgcggcatacgatcgacctgctgcaattcgtc
gacgccgaggagatcgagccgctctatttcaaccggccttactatgtgctgcccgacggt
gaagtcgccgaggagggctatcgcgtcctgcgcgacgcgctctgggccaagcataaggtc
ggcatcggccagctcactttgcgtggacgggagcatctcgtcgctttgttcccgatgggc
gaagggcaggggctcgtgctcgatacgctgcgctacgacagcgagctgaagaatgccgac
gacatcttctccgcgatcggccgcgagaagccgcgcgaagacatggtgcagatggccgag
gatttgatcgaacggcgcagcgagcctttcgatccggcgaaattccgcaaccactatgcc
gaagccttgcgcgagctggtgaaggcgaagctcgggcgcggcgagaccgtgccggtcgag
gagcaggtcgagcccggcgccaaggtgctcgatttcatggaggcgttgaaacgctcggtc
gccgccagcgggggcggggaagcgccgcctgagccgccgaagaagggcaagcgggcggct
gccccaccggcgaagaaacccccagccgcgaaatcctccaaggctgcgaaggcgccggcg
cggcgccgggccggataa
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