Methylocystis iwaonis: SS37A_30130
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Entry
SS37A_30130 CDS
T09113
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
miwa
Methylocystis iwaonis
Pathway
miwa03030
DNA replication
miwa03410
Base excision repair
miwa03420
Nucleotide excision repair
miwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
miwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS37A_30130 (polA)
03410 Base excision repair
SS37A_30130 (polA)
03420 Nucleotide excision repair
SS37A_30130 (polA)
03440 Homologous recombination
SS37A_30130 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miwa03032
]
SS37A_30130 (polA)
03400 DNA repair and recombination proteins [BR:
miwa03400
]
SS37A_30130 (polA)
Enzymes [BR:
miwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SS37A_30130 (polA)
DNA replication proteins [BR:
miwa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SS37A_30130 (polA)
DNA repair and recombination proteins [BR:
miwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SS37A_30130 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SS37A_30130 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
BDV35484
LinkDB
All DBs
Position
3170768..3173773
Genome browser
AA seq
1001 aa
AA seq
DB search
MTLTHKPVGPGSHVFLVDGSSFVFRAYFQSIRQDAKYNYRSDRLPTGAVRLFCTKLLQFV
REGAAGATPTHLAIIFDKSENSFRKEIYPEYKAHRSEPPEDLVPQFPLMRAAVRAFGLTP
IEQDIYEADDLIATYAAQAREKGADVLIVSADKDLMQLIGPGVTMYDPASGTAGAKGSRE
ERLINEAEVVDYFGVTPDKVVDVQALAGDSTDNVPGAKGIGIKTAAQLINEYGDLDSLLE
KAPGIKQPKRREALTDPQAVALIRLSKKLVELVRDAPVETKLDDLGLHQPDPNKLVAFLQ
AMEFTTITRRVGDLYGVDIHDIEPDPHYVGAAGWRARNGEVDHAAAPAGPKPKEPRAPAA
DKATEGFSPATLAGARKAAALAEKIDRSTYETVMSVERLEEWVADAFEAGIVALDTETTS
LDPLSCDLVGVSLALGPGRACYIPLQHREGGNGDLFGGADLVAGQIPLETAIEKLKPLFE
DDAVLKVAQNMKYDLLVLSRYGIEVAPMDDTMLISYALDTGRNNHGLDELAQKHLGHENI
TFAQVAGSGRTFIGFARVPLDKATEYAAEDADVSLRLWRALKPRLAAEGKTAVYETLERP
MVTTLAHMERRGITIDRHMLSRLSGEFAQDMARLEADIFDLAGASFNLGSPKQLGDILFG
KMGLPGAKKTATGAWSTSASVLEDLAAEGNEFCRRILDWRQLSKLKSTYADALPGFVNKE
TGRVHTCYSLAATTTGRLSSSEPNLQNIPVRNEAGRKIRKAFVAPPGRVLISADYSQIEL
RLLAHIADIPQLKKAFADGVDIHAMTASEMFGVPVKDMPPEVRRRAKAINFGIIYGISAF
GLANQLSIPREEAGAYIKRYFERFPGIRDYMDATKKTVREKMCVTTIFGRALHFPRIASA
NASDRAFYERAAINAPIQGAAADIIRRAMVRMDAALVEADLSAQMLLQVHDELVFEAPEA
EAEATIALARRVMEDAPLPAVQLTVPLQVDARAAKNWDEAH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgacactcacgcacaagcccgtcggccccggctctcacgtcttcctcgtcgacggctcc
tccttcgtctttcgcgcttatttccagtcgatccggcaggacgcgaaatacaactatcgc
tccgaccggctgccgaccggcgccgtgcggctcttctgcaccaagctcctgcaattcgtg
cgcgaaggcgcggcgggcgcgacgcccacccatctcgccatcattttcgacaagagcgag
aacagcttccgcaaggaaatctatcccgaatacaaggcgcatcgcagcgagccgccggaa
gacctcgtcccgcaatttcccctgatgcgggcggctgtgcgcgccttcggcctcacgccg
atcgagcaggacatctacgaggccgacgacctcatcgccacttacgccgcacaggcccgt
gagaagggcgcggatgtgctcatcgtctccgccgacaaagacctcatgcagctcatcggg
ccgggcgtgaccatgtacgacccggcctcgggaacggccggcgccaaaggctcgcgcgaa
gaacggctcatcaatgaggcggaggtcgtcgactatttcggcgtcacgccggacaaagtt
gtcgacgtgcaggcgctcgccggcgattcgacggataatgtgccgggcgccaaaggcatc
ggcatcaagaccgccgcccagctcataaatgaatatggcgatctcgactcgctgctggaa
aaggcgcccggcatcaagcagcccaagcgccgcgaggcgctgacggacccgcaagcggtc
gcgctcattcgcctctccaaaaagctcgtcgagctcgtgcgcgacgcgccggtggaaacc
aagctcgacgatctcggcctgcatcaacccgatccgaataagctcgtcgccttcctgcag
gcgatggagttcacgacgatcacacggcgcgtcggcgatctctatggcgtcgatattcac
gacatcgaacccgatccgcattatgtcggcgcggcaggctggcgcgcccgcaatggcgag
gtcgatcacgccgcggcgccggcggggccaaagccgaaggagccgcgtgcgcctgccgcc
gacaaggcgacggaaggcttctcgcccgcgacgctcgccggcgcccgcaaagcggcggcg
ctcgccgagaagatcgaccgctcgacctatgagaccgtcatgtccgtcgagcggctcgaa
gaatgggtcgccgacgctttcgaggcggggatcgtcgcgctcgacacggagaccacatcg
ctcgatccgctgagctgcgatcttgtcggtgtgtcgctcgcgctcgggccgggccgcgcc
tgctatattccgcttcagcatcgcgaaggcggaaatggcgatctctttggcggcgccgat
ctcgtcgccggtcagataccgctcgaaaccgcgatcgaaaaactcaagccgctctttgag
gacgacgccgtcctcaaggtcgcgcagaacatgaaatatgatctgctcgtgctctcgcgc
tacggcatcgaagtcgcgccgatggacgacacgatgctgatctcctatgcgctggataca
ggccgcaacaatcacgggctcgacgagcttgcgcaaaaacatctcggacacgagaacatc
actttcgcgcaagtggcgggctcgggccgtactttcatcggcttcgcgcgcgttccgctc
gataaagcgacggaatatgcagccgaggacgccgacgtgtcgctgcgcctgtggcgcgcg
ctgaaaccgcgcctcgccgccgaaggaaagaccgccgtctatgagacgctggagcgcccc
atggtgacgacgctggcgcatatggagcggcgtggaatcaccatcgaccgacacatgctc
tcgcgcctctcgggcgagtttgcgcaggacatggcgcggctggaggcggatattttcgat
ctcgccggcgcgagcttcaatctcggctcgcccaagcagttgggcgacattctcttcggc
aagatgggcctgcccggcgccaaaaagactgcgaccggcgcctggtcgacctccgccagc
gtgctcgaggatctcgcggcggaaggcaatgaattctgccgccgcattctcgactggcgc
cagctttcgaagctcaaaagcacttacgccgacgcgctgcccggcttcgtgaacaaggaa
accggccgcgtccatacctgctattcgctcgccgcgacgacgacgggtcggctttcgtcg
tccgagcccaatctgcagaacattcccgtgcgcaacgaggccggccgcaagatccgcaag
gccttcgtcgctccgccggggcgtgtgctgatctcggcggattactcgcagatcgagctg
aggctgctcgcgcatatcgccgatattccgcaattgaagaaggctttcgccgacggcgtc
gacattcacgccatgacggcctcggaaatgtttggcgtgccggtgaaggatatgccgccg
gaagtgcgccggcgcgccaaggcgatcaacttcggcatcatctacggcatttccgccttt
ggcctcgccaatcagctctccattccgcgcgaggaggcgggggcctatatcaagcgctat
ttcgagcgctttcccggcatccgggactatatggacgcgaccaagaaaaccgtgcgcgag
aagatgtgcgtgacgacgattttcggccgcgcgctgcatttcccgcgcatcgcctcggcc
aatgcgtccgaccgcgccttttacgagcgcgccgcgatcaacgcgccgatacagggcgct
gccgccgacatcatccgccgcgccatggtgcgcatggacgccgcgttggtcgaagcggat
ttgtcggcgcagatgctcttgcaagtgcacgacgagctcgtcttcgaggcgccggaagcg
gaagccgaggcgacaatcgccctcgcccgccgcgtgatggaagacgcgcccctccccgcc
gtgcagctcacagtgccgctacaggtcgacgcccgcgcggccaagaactgggacgaagcg
cattag
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