Methanocaldococcus bathoardescens: JH146_0693
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Entry
JH146_0693 CDS
T03253
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mjh
Methanocaldococcus bathoardescens
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjh03019
]
JH146_0693
03009 Ribosome biogenesis [BR:
mjh03009
]
JH146_0693
04131 Membrane trafficking [BR:
mjh04131
]
JH146_0693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjh04147
]
JH146_0693
Messenger RNA biogenesis [BR:
mjh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
JH146_0693
Ribosome biogenesis [BR:
mjh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
JH146_0693
Membrane trafficking [BR:
mjh04131
]
SNARE
SNARE associated proteins
Others
JH146_0693
Autophagy
Aggrephagy
Other aggrephagy associated proteins
JH146_0693
Exosome [BR:
mjh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JH146_0693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
AAA_2
TIP49
AAA_14
AAA_33
Vps4_C
AAA_22
nSTAND3
AAA_28
AAA_18
IstB_IS21
DUF815
AAA_17
Sigma54_activat
Mg_chelatase
RNA_helicase
AAA_7
Zeta_toxin
AAA_24
PhoH
AAA_3
Sigma54_activ_2
TsaE
ABC_tran
ATP-synt_ab
NB-ARC
Parvo_NS1
bpMoxR
AAA_30
ATPase
SLFN-g3_helicase
ResIII
AFG1_ATPase
Baculo_PEP_C
Perilipin
Molydop_binding
DUF1572
Abi_C
eIF3_N
Allexi_40kDa
DUF2203
APG6_N
COG3_N
LOH1CR12
Motif
Other DBs
NCBI-ProteinID:
AIJ05542
UniProt:
A0A076LFE8
LinkDB
All DBs
Position
696742..699453
Genome browser
AA seq
903 aa
AA seq
DB search
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGTKGKAYAIVYRGFLEDAG
KGIIRIDGYLRQNAGVAIGDRVKVKKVELKEAKKVVLAPTQPIRFGPGFEDFVKRKIMGQ
VLSKGLKVTIGVLGTALTFVVVNTSPAGPVRVTDFTHVELKEEPVSEIKETKIPDVTYED
IGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLV
AQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHT
RNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNL
KVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRK
ARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPD
IIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRGMNLAEDVNLEELAKKTEGYTGADI
EALCREAAMLAVRENIGKPWGIETALRDLINYLQSISGTFRGAAVELNSVIKATKERESA
EAGEFSELKNAVGRIINVLSPAKEKIEAVEKEVDNFLEIINKEDLKPSEKDEANKLAKYL
KDILGKLKEMIDNIYELENKLGSLSQQVSAEEIDEIIKTTQNIIHRFTTSLDELKNILKD
IESIRLRVSTKDVKIKKEHFMKALEKIKPSVSKEDMRVYEKLAQEYGRATSVEKKKEEGR
EVI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagagctaaaagtcgctgaagcatatcaaggagatgtcgggaggggtattgca
agaatagacccttatacaatggaagaactcggcttaaaaccaggggatgttattgaaatt
gaaggaactaaggggaaagcttacgctatagtttatagaggtttcttagaagatgctgga
aaaggaattattagaattgatggttacttaaggcagaatgctggagtagctattggagat
agagtaaaagttaaaaaagtagagcttaaagaagcaaagaaagtagttttagccccaact
caaccaattagatttggtcctggatttgaagactttgttaagagaaagataatggggcaa
gttttaagtaaaggtttaaaagttaccattggagttttagggactgctttaacatttgtt
gttgttaatacatcaccagcaggacctgttagagtaactgactttacacacgttgagttg
aaagaagagccagttagtgaaattaaagaaactaagattccagatgttacatatgaagat
attggtggtttgaaagaggaagttaagaaagttagagagatgatagagcttccaatgaga
catccagagttgtttgaaaagttaggaattgaaccacctaagggagttttattagttgga
ccaccaggaactggtaagacattattggctaaagcagttgctaacgaagctggagcaaac
ttctatgtaattaatggtccagaaataatgagcaaatatgttggagaaacagaagagaat
ttaagaaagatatttgaagaagctgaagagaatgctccaagtataatattcattgatgaa
attgacgctatagcccctaaaagagatgaagctacaggagaagttgagagaagattagtt
gctcagctcttaaccttaatggatggattgaaaggaagaggacaagttgttgttattgga
gctactaacagaccaaatgcattagacccagctttaagaagaccaggaagatttgataga
gagattgttattggagttccagatagagaaggtagaaaagaaatcttgcaaatacacaca
agaaacatgccattagctgaagatgttgatttagattacttagcagatgtaacacatgga
tttgttggggctgatttagcagctttatgtaaagaggcagcaatgagggcattgagaaga
gtattgccaagtattgacttagaggcagaagagattccaaaagaagttttagataactta
aaagtcacaatggatgacttcaaagaggcattgaaggatgttgagccatcagcaatgaga
gaggttttagttgaagttccaaatgttaagtgggaagatatcggaggattagaggaggtt
aagcaagaattaagagaggcagtagaatggcctttaaaagctaaggaagtatttgaaaaa
ataggagttagaccacctaagggagtattgctatttggaccaccaggaacaggtaagaca
ttattagctaaggctgtagctaacgaaagtggagcaaacttcataagcgttaaggggcca
gaaatcttcagtaagtgggtaggggaaagtgaaaaggcaataagagagatattcagaaaa
gcaagacagtcagcaccatgtataatattcttcgatgagattgatgctatagcaccaaag
agaggtagagatttaagttcagcagttactgataaagttgtcaaccaattattaactgaa
ttggatggaatggaagaaccaaaggatgttgttgttattgctgcaacaaatagaccagat
atcattgacccagctttattgagaccaggaagattagatagagttatattagtcccagtt
ccagatgaaaaggcaagattggatatattcaagatacacacaagaggtatgaacttagcc
gaggatgtcaacttagaagagttagctaagaagactgaaggatacactggagctgatata
gaggcattgtgtagagaagcagcaatgttagcagttagagagaatataggaaaaccatgg
ggaattgagacagctttaagagatttaatcaactacttgcagagcatttcaggaacattc
agaggagcggctgtagagttaaacagtgtcattaaagctacaaaagagagagaatctgct
gaagcaggagagtttagtgagttaaagaatgctgttggaaggataattaatgtgttatca
ccagctaaggagaaaattgaagctgtagagaaagaagttgataacttccttgaaattata
aacaaagaggacttaaaaccatcagagaaagatgaagctaataagttagcaaaatactta
aaggacatattaggcaagttaaaagaaatgatagacaacatctacgaattagagaacaag
ttaggaagcttgtcacagcaagtttcagctgaagagattgatgagataatcaaaacaaca
caaaatatcatacacagattcacaacatcattggatgagctcaagaacatattaaaggat
attgaaagcataagattaagagtttcaacaaaagatgtcaaaattaagaaagaacacttc
atgaaagctcttgaaaagattaaaccatcagtaagtaaggaagacatgagagtttatgaa
aagttagctcaagaatatggaagagccacatcagttgaaaagaaaaaagaagaaggtaga
gaagtaatctaa
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