Mesobacillus jeotgali: FOF60_15125
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Entry
FOF60_15125 CDS
T08547
Name
(GenBank) DNA ligase D
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mjo
Mesobacillus jeotgali
Pathway
mjo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FOF60_15125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjo03400
]
FOF60_15125
Enzymes [BR:
mjo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FOF60_15125
DNA repair and recombination proteins [BR:
mjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FOF60_15125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
DUF2811
Motif
Other DBs
NCBI-ProteinID:
UYZ20405
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Position
2958051..2959886
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AA seq
611 aa
AA seq
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MLKPMLPTLAFEAPQGEEWRYEIKFDGFRALLTWDSEIELTSRNGKPLLPLFPELENFLT
ANKEKFQPFLPLTLDAELVYLENPYKANFGAIQIRGRMRSKDKIKSEADRNPCRLMVFDL
LKVKGKNIASESYKGRRTKLHSLFSELDLPLSPNHQNPDLVQLIPSERDLKSLWEKVVIY
DGEGIIAKQQNSKWEEGKRTEAWIKSKNWKYVSCFVTAYEKSNGYFYISVYKDSKIHQIG
LVIFGFKPEEKNALHQIIKQNKSSEDAQFIYVEPGICLDVKYLEIYEDQLREPHFHQFRF
DLSPDTCTYEKFVFQQKNLPPDIEITHPDKPIWEEPPIQKVDYIHYLREISPYMLPFLED
RLLTVIRYPHGMFGEAFYQKNVPDYAPDFVQTAKSEGIEYIVCNNMKTLLWLGNQIAIEF
HIPFQKINSKGPDEIVFDLDPPSREDFHLAIKAAVYIKEVLDELKLISFIKTSGNKGLQV
YIPLPDNHYSYDDTRLFTSFIANYLVSKEPESFTIERLKKNRGSRLYVDYIQHAEGKTIV
SPYSARGKSHAGVATPLFWEEVNENLRIEDFHLGTIIQRVQKSGCPFRTYFAAKAEQNFN
PVLEVLKSKKS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaccaatgctccctacactggcatttgaagcgccacagggggaagaatggcgt
tatgagattaaatttgatggcttccgtgcgttattgacatgggattctgaaattgaactg
acaagccgcaatggtaaaccgctgctccctttgttcccagaattagaaaacttccttact
gccaacaaggaaaagttccagccatttttgcctctgacattggacgctgagctggtttat
ttggagaatccctacaaagccaatttcggggcgattcaaatcagaggaagaatgaggtca
aaggataaaattaaatctgaagctgacaggaatccatgcaggcttatggttttcgacctt
ttgaaggtaaaaggaaaaaatatagcctctgaaagctacaaaggcaggaggacaaagctt
cattccctgttttccgagctggatctgccactctctcccaaccaccaaaaccccgactta
gtccagcttatcccgagtgaaagggatttgaagagcttatgggaaaaagtcgtcatttac
gatggggaaggtatcattgccaaacaacagaatagcaaatgggaggaaggaaaacggacg
gaagcgtggattaaatcgaaaaactggaagtatgtttcctgctttgtcacggcttatgaa
aagtccaacggatacttttatatctcagtttacaaggattcaaaaatacatcaaattggg
ctggtaatcttcgggtttaagcccgaagaaaaaaatgcccttcatcaaatcatcaagcaa
aataaaagtagtgaagatgctcaatttatttatgtggaaccaggaatctgtcttgatgta
aagtatctggaaatatatgaggatcagcttcgcgagcctcattttcatcaattccgtttc
gatttaagtcctgatacctgtacttatgaaaagtttgttttccaacaaaagaacctgcct
ccggatattgaaatcacgcaccccgataaaccgatttgggaagaaccgccaatccaaaag
gtggattacatccattatttaagggagatttctccttatatgcttccattcctggaggac
cggctgttaactgttatccgctatcctcacggcatgtttggcgaagccttttaccaaaaa
aacgttccagattacgcaccggattttgtccagaccgcaaaatcggaagggatcgaatat
attgtctgcaataatatgaaaacgttgctttggctcgggaatcaaattgccattgagttt
catatccccttccagaaaatcaacagcaagggaccggatgaaatagtctttgacctggac
ccgccatcgagggaagatttccatttagcgattaaggctgctgtttatatcaaagaggtg
ctggatgaattaaaattgatcagctttatcaagacttctgggaataaaggactccaggtg
tacatcccgctcccggataaccattatagctacgatgatacaagattgtttacctccttt
atcgcgaactaccttgtatcaaaggaaccggaatcatttacaattgaaagactgaagaaa
aacaggggcagccgattatatgtggattacatccagcatgctgaaggcaaaacgattgtc
agtccctattccgctcgcggaaaatcacatgcaggtgtggccactccgttattttgggaa
gaagtgaatgagaatctaagaattgaggatttccatttaggaacgatcatccagcgcgtg
caaaagtcaggctgtccgttcaggacttattttgcagctaaagcagaacagaatttcaat
ccagttctggaggttctgaagtcaaaaaaatcctga
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