Manis javanica (Malayan pangolin): 108386102
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Entry
108386102 CDS
T06054
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03410
Base excision repair
mjv04140
Autophagy - animal
mjv04217
Necroptosis
mjv04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108386102 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108386102 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
108386102 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
108386102 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mjv03036
]
108386102 (HMGB1)
03400 DNA repair and recombination proteins [BR:
mjv03400
]
108386102 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjv04147
]
108386102 (HMGB1)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
108386102 (HMGB1)
DNA repair and recombination proteins [BR:
mjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108386102 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
108386102 (HMGB1)
Exosome [BR:
mjv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108386102 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
NOA36
Nop14
Nucleo_P87
Radial_spoke
PPP4R2
RNA_pol_3_Rpc31
DDHD
Motif
Other DBs
NCBI-GeneID:
108386102
NCBI-ProteinID:
XP_036859797
LinkDB
All DBs
Position
Unknown
AA seq
164 aa
AA seq
DB search
MSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRP
KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA
KKGVVKAEKSKKKKEEEEDEEDEEEEEEEEDEEEEDEEEDDDDE
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaagagaaaggaaaatttgaagacatggcaaaggcagacaaggcccgttat
gaaagagaaatgaaaacttacatccctcctaaaggggaaacaaaaaagaagttcaaggat
cccaatgcccccaagaggcctccttcggcctttttcttgttttgttctgagtatcgccca
aaaatcaaaggagagcatcctggcctatccattggtgatgttgcaaagaaactgggagag
atgtggaataacactgctgcagatgacaagcagccttacgaaaagaaagccgctaagctg
aaggaaaaatacgaaaaggatattgctgcataccgagctaaaggaaagcctgatgccgca
aagaagggagttgtcaaggctgagaaaagcaagaaaaagaaggaagaggaggaagatgag
gaagatgaggaggaggaggaggaggaggaggatgaggaggaggaagatgaggaggaagat
gatgatgatgaataa
DBGET
integrated database retrieval system