Manis javanica (Malayan pangolin): 108398580
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Entry
108398580 CDS
T06054
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108398580 (SCAF4)
03041 Spliceosome [BR:
mjv03041
]
108398580 (SCAF4)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108398580 (SCAF4)
Spliceosome [BR:
mjv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
108398580 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108398580
NCBI-ProteinID:
XP_017518154
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAESVTNNEGSPPPPVKVSSEPPQATTNSVPTLSQLP
STDTFAAVAQLFHTTQSQQLQQILQTFQQPPKPQSPAIDSAMMAQVQAITAQLKTAPTQP
SEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAAASSAPAVATVAAVPPAPT
AAAPPAAPPSASPPQTPFGFLGDGMQQPAYTQHQSMDQFQPRMMAVQQDPVHHQVPLPPN
GQMPGFGLLPTPAFPPMAQSVIPPVPPVQQPFQASFQAQSEPLTQKAHQEMEVEQPCIPE
VKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRD
REKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPR
GCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIP
WDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKHDNEVAQNGGAETSHTEPVSPIPKPLP
VPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPPPP
FLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGN
PIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGSQGVAPGPVIGLQ
APSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPH
GMKGPFPPHGPFVRPGGMPGLGGPGPGPGGSEDRDGRQPPAQQQPPAPQQPQQPPPAQQP
PPAQQQPQPFRNDNRQQFSSGRDQERFGRRSFGNRVENDRERYGNRNDERENSNRERREW
GRRSPDRHRDLEERSRRSSGHRDRERDSRDRESRREKEENRGKEKPEVTDRAGGNKTTEP
PVSQVGNVDTASELDKGESESAVVKPEELPAEATSSVEPEKDSGSAAEAPR
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctcct
atctctcgagccaagatgattctcattactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccaggattatatgtaatcgactcaattgttcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataacagccacattccaatatttgtat
ctttgtccatctgaagataagagtaaaatagttcgagtgcttaacctttggcaaaaaaat
ggagtattcaagattgaaattattcaacctcttttggacatggcagcaggaaccagtaat
gctgcccccgtagcagaaagtgttactaataacgaaggttcacctccacctccagttaaa
gtttcttctgaacctccacaggccactacaaattccgtaccaactctatcacagttgcct
agcactgatacttttgctgctgtggcccaactgtttcacacaactcaaagtcaacagctt
cagcagatccttcagacttttcagcagcctccaaaaccacagtctcctgccattgacagc
gctatgatggctcaggttcaggctatcacagctcagttaaagacagctcctacacaacca
tctgaacaaaaagctgctttccccccacctgaacaaaaaactgcatttgacaagaagcta
cttgatagatttgattatgatgatgagccagaagctgtagaggaatcaaagaaagaagat
gctgctgcctcctcagctcctgctgtggccactgtggctgctgtgccccctgcgcccaca
gctgctgccccgcccgccgctcctccatctgcgtctcctccacagacaccctttggattt
cttggagatggcatgcagcaaccagcatatactcaacatcaaagcatggatcagtttcaa
cctcgaatgatggcagtacagcaggatccagtgcaccatcaggtcccactgcctcctaat
ggacagatgccaggatttggccttcttcctacacctgcatttcctcccatggctcagtct
gtgattcctccagttccacctgtgcagcagcctttccaagcttcttttcaggcacagagt
gaaccacttacacagaaggcacatcaggaaatggaggtagaacagccctgtattccagag
gttaaacggcatatgtctgataacaggaagtcaagatctaggtctgcatccaggtcacca
aaaaggaggcgatctcgatctggttctagatctcgaagatctcgtcatcgacgttctcga
tctcggtccagagataggcgccgacattctcctagatctcgatcccaagaaagacgggat
cgagaaaaagaaagagaacgccgacaaaaaggccttcctcagatcaaaccagaaactgca
agtgtttgtagcactacactctgggtgggacagctggacaaaaggacaactcaacaggat
gttgccagtctcttagaagagtttggtccaattgaatcaatcaatatgattcctcccaga
ggttgtgcctatattgttatggttcataggcaagatgcttatcgtgccctgcagaaactg
agccgaggaaactataaagtgaaccagaaatccataaagattgcctgggccctgaacaaa
ggaataaaggcagattataagcagtattgggatgtggaactgggtgttacttatattccg
tgggacaaagtcaagcccgaagaactggagagtttttgtgaaggaggaatgttggacagt
gatacacttaatccagactggaaaggaattcccaaaaagcatgacaatgaagttgctcaa
aatggaggggcagaaacctcacacacagaaccagtatcacccatacctaaacctctccct
gtgcctgtccctccaattcctgttcccgcacctatcacagtgccacctccgcaggtccca
ccacatcagccgggtccccctgtggttggcgctctccagccgcccactttcacacctcct
ttgggaattccccctccgggttttggtcctggtgttcctccacctcctcctcctccacca
tttttacgcccaggattcaacccgatgcatttaccaccaggttttcttcctcctggaccc
ccacctcctataactccaccagtatccattcctcctcctcacactccaccaataagcatc
ccaaactctactatcgctggtataaatgaagacactacaaaagacttatctattggaaat
cccattccaacagtggtgtctggggctagaggaaatgccgagtctggtgacagtgtgaaa
atgtatggctctgctgtgccacctgctgcacccacgaatctacccacccctcctgtaacc
cagcctgtttcacttcttggttctcaaggagtcgcacctggtcctgtaattgggctccaa
gcaccatccactggcctccttggtgcccgacctggcctgatcccactccagcgcccgccg
ggaatgcctccacctcacttacagcgatttcctttgatgccaccccgtcccatgccacct
catatgatgcacagaggcccaccaccaggcccagggggttttggaatgcctccacctcat
ggaatgaaaggtccctttccacctcatggccccttcgttaggcctggtggaatgccaggg
ctcgggggcccggggccaggccccgggggttccgaggacagagacggaaggcagccgcca
gcacagcagcagccgccggcaccacagcagcctcagcagccgcctccagctcagcagccg
cctccagctcagcagcagccgcagccgtttagaaacgataacaggcagcagttcagttca
gggagagaccaggaaaggtttggaagaagatctttcggaaatagggtggagaatgaccgg
gaacggtatgggaaccggaatgatgagagagagaatagtaaccgtgaaaggagagagtgg
ggaaggaggagccccgaccggcacagagacttggaagagagaagtagacgctctagtggg
catcgagacagagagagagattcgagagatagagagtctcgtagagagaaggaagaaaac
cgaggaaaggaaaagcctgaggtgacagacagggcaggtggtaacaaaaccactgaacct
cccgttagccaagtggggaacgtagacaccgcctcagaacttgataagggggagtctgag
tccgcagttgtaaaacctgaagagttacctgctgaggctacctcatccgttgaacccgag
aaggattctggctcagcagcagaggctcctcgttaa
DBGET
integrated database retrieval system
