Methylacidiphilum kamchatkense: kam1_1237
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Entry
kam1_1237 CDS
T06102
Name
(GenBank) uracil-DNA glycosylase family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mkc
Methylacidiphilum kamchatkense
Pathway
mkc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
kam1_1237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkc03400
]
kam1_1237
Enzymes [BR:
mkc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
kam1_1237
DNA repair and recombination proteins [BR:
mkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
kam1_1237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QDQ42464
UniProt:
A0A0C1RST8
LinkDB
All DBs
Position
complement(1230608..1231315)
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AA seq
235 aa
AA seq
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MDPKDRALSDLEERVIACRLCPRLVAWREEILKHKPKRFAKETYWSRPVPGFGDSSAKLL
IVGLAPAAHGGNRTGRIFTGDRSGDFLFDALYRFGYSNSPLSIGKNDSLLLNKVYITATV
RCAPPKNKPLLEEIINCRPYLIEELNILKNVHIILALGRIAFDGIFETLKIMAKEKGEPF
PIKKPAFRHGLELSLPDGKILVASFHPSQQNTFTGRLTKSMFDAVFKRIDQLLNS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaagatcgagcactttccgatctagaggaaagagtgattgcttgccgtctc
tgtccgagacttgtagcctggagggaagaaatactaaagcataaaccgaaaagatttgcc
aaagaaacgtattggtccagacccgttccaggatttggagatagttcggctaagctactt
attgttgggcttgccccagcagctcacggaggaaaccgtactggtagaatctttacgggc
gatcggagtggggattttctcttcgatgccctctaccgttttggatattccaacagtcca
ttatcgattggaaaaaacgattctttactccttaataaggtctacattacggctacagtt
cgctgtgcgcctcctaaaaataaaccgcttttagaagaaattattaattgcaggccatat
ttgatagaagaattaaacattctaaaaaacgttcatatcattttggctttgggccgcatt
gcttttgatggaatctttgaaacacttaaaattatggccaaagaaaaaggtgaacctttt
ccaatcaaaaagcccgcctttaggcatggactcgaactatccctcccggatggtaaaatt
cttgtcgcttcctttcatcccagccaacaaaacacctttacaggtagactcaccaagagc
atgttcgatgctgtttttaagcggattgatcaacttttaaatagctag
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