Mycolicibacillus koreensis: MKOR_03240
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Entry
MKOR_03240 CDS
T06447
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mkr
Mycolicibacillus koreensis
Pathway
mkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKOR_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mkr03019
]
MKOR_03240
03009 Ribosome biogenesis [BR:
mkr03009
]
MKOR_03240
Enzymes [BR:
mkr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MKOR_03240
Messenger RNA biogenesis [BR:
mkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MKOR_03240
Ribosome biogenesis [BR:
mkr03009
]
Prokaryotic type
rRNA processing factors
MKOR_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BBY53073
UniProt:
A0A7I7S8P5
LinkDB
All DBs
Position
364586..367474
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AA seq
962 aa
AA seq
DB search
MTDDVQSADTSENPQPGELPEKLRVHSLARVLGTTSRRVLEALAELDGRMRSAHSSVDRV
DAVRVRDLLDAAAEAAPETPETPGVAPESPEAAPESPEVAEPESRLMLETPPPTPAGEQP
GYMPLFVAPQPVEPARRADTDSAEDSDSADPGTDRDGDSDTDGDDADRPSGRRRRRGRRG
RGRGRGEQNGDDDGAEDSDSGETTGTGGAPSGGDADGAEDSDGGDGSDDNGGSDPGNRRR
RRRRRRKNGSGDGGDEPSADDPPNTVVHERAPRSASKDSEIQGINGSTRLEAKRQRRRDG
RDAGRRRPPVLSEAEFLARREAVQRTMVVRDKVRTEPPHEGSRYTQIAVLEDGIVVEHFV
TSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGANRKIEQ
ALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKQ
ILREVVPPEAGVIIRTASEGIKEDDIRADVTRLQERWSQIDATAAQTKKKAAGAAVSLYE
EPDVLVKVIRDLFNEDFSELIVSGDDAWTTITDYVNAVAPELIDKVTRYAPPTGPEGQPG
PDVFAVHRIDEQLTKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTK
NNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTS
LGLVQLTRKRLGTGLIEAFSTSCPHCAGRGITVHADPVDSAPSSGGRGSGSGGRRNRRSR
KGRSDEPVVAKVPAHTAGDHPMFKAMAAASQADETDEDTTEQQGESATAARARREADAAV
GDVDEAAAQAGDTAADRTPPAAFPEEYTDEDPDDDYEDADDDADDETDEDEEEFDEDYSS
DFDDLEDDTDDDTEDDSDDSEDSDDADDAEDYDEQDEDDFPPARPRRRRAAARPAGPPAH
DG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatgatgttcaatccgcagacacctccgaaaacccgcagccgggagagctcccc
gaaaagctgagggtgcattccctggcccgcgtgctggggaccaccagccgccgcgtactc
gaggcgctcgccgaactcgacggtcggatgcgcagcgcccactccagcgtcgaccgcgtc
gacgcggtccgggtgcgtgacttgctggacgccgccgccgaggccgcccccgagaccccc
gagacccccggggttgcacccgagagccccgaggccgcacccgagagccctgaggtcgcc
gagccggaatcgcggttgatgctggagaccccaccgccgaccccggcgggcgagcagccc
ggatacatgccgctgttcgtggcgccgcagccggtcgaaccggcccggcgcgccgacacc
gacagcgctgaggacagcgacagcgccgaccccggcaccgaccgcgacggcgacagtgac
accgacggcgacgacgccgaccgtccctcgggtcggcgccgccgccgcggccgtcgtggc
cggggccgcggccgcggggagcagaacggcgacgacgacggcgccgaggactccgacagc
ggggagaccaccggcacgggcggtgcgcccagcggcggggacgccgacggcgccgaggac
tccgacggcggtgacggatccgacgacaacggcggttcggaccccggcaaccggcgccgc
cgccggcgccgccgccgcaagaacggctccggggacggcggcgacgaaccgtcggccgac
gacccgccgaacaccgtcgtccacgagcgcgccccccgcagcgcctccaaggactccgag
atccagggcatcaacggctccacccgcctggaggccaaacggcagcgccgccgcgacggc
cgcgacgccgggcgccgccggcccccggtgctctccgaggccgaattcctggcccgccgc
gaagcggtgcagcgcaccatggtggtccgcgacaaggtgcgcaccgaaccgccgcacgaa
gggtcccgctacacccagatcgcggtgctcgaagacggcatcgtcgtcgaacacttcgtc
acctccgcggcgtcggcctccctggtgggcaacatctacctggggatcgtgcagaacgtg
ctgccgtcgatggaggccgcgttcgtcgacatcggccgcggccgcaacggtgtgctctac
gccggcgaggtgaactgggaagccgccgggctcggcggggcgaatcgcaagatcgagcag
gccctcaaacccggcgactacgtggtggtgcaggtcagcaaggacccggtggggcacaag
ggggcgcggctgaccacccaggtgtcgctcgccggccgctacctggtctacgtgcccggc
gcgtcctcgaccgggatcagccgcaaactgcccgacaccgaacgtcagcggctcaagcag
atcctgcgcgaggtggtcccgccggaggccggggtgatcatccgcaccgcgtcggagggc
atcaaagaagacgacatccgcgccgacgtcacccgtctgcaggagcgctggagtcagatc
gacgcgaccgcggcgcagaccaaaaagaaggccgccggggcggcggtcagcctctatgag
gaacccgacgtgctggtcaaggtcatccgcgacctgttcaacgaggacttctccgagctg
attgtctccggcgacgatgcctggaccacgatcaccgactatgtcaacgccgtcgcgccg
gaactcatcgacaaggtcacccgctacgccccgccgaccggacccgagggccagcccggc
ccggacgtgttcgcggtgcaccgcatcgacgaacagctcaccaaggcgatggaccgcaag
gtgtggctgccgtcggggggcaccctggtgatcgaccgcaccgaggcgatgaccgtcgtc
gacgtcaacaccggcaaattcaccggcgccggcggcaacctcgaggagaccgtcaccaaa
aacaacctcgaggcggccgaggagatcgtgcgccagctgcggctgcgcgacatcggcggg
atcgtggtcatcgacttcatcgacatggtgctggagtccaaccgcgacctggtgctgcgg
cggctcaccgaggcgttggcccgggaccgcacccgccaccaggtctccgaggtgacctcg
ctgggcctggtgcaactgacccgcaaacggctcggcaccgggctcatcgaagcgttctcc
acctcgtgtccgcactgcgccggccgcggcatcaccgtgcacgccgacccggtggactcc
gccccctcctccgggggacgcggatcgggttccggcgggcggcgcaaccggcggtcccgc
aagggccgctccgacgagccggtggtggccaaggtcccggcgcacaccgccggggaccac
ccgatgttcaaggcgatggccgccgccagccaggcggacgagaccgacgaggacaccacc
gagcagcagggtgaatccgcgaccgccgcccgcgcccggcgggaggccgacgccgcggtc
ggcgacgtcgacgaggccgccgcgcaggccggcgacaccgccgccgaccgcaccccgccc
gcggcgttccccgaggaatacaccgacgaggatcccgacgacgactacgaggatgccgac
gacgatgccgacgacgagaccgacgaggacgaggaggagttcgacgaggactactccagc
gacttcgacgacctcgaggacgacaccgacgacgacaccgaggacgactccgacgactcc
gaggactccgacgacgccgacgacgccgaggattacgacgagcaggacgaggacgatttc
ccgccggcgcggccccggcggcgtcgcgccgcggcccgtcccgccggccccccggcgcac
gacgggtga
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