Mycobacterium kubicae: I2456_09510
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Entry
I2456_09510 CDS
T07774
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I2456_09510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mku03019
]
I2456_09510
03016 Transfer RNA biogenesis [BR:
mku03016
]
I2456_09510
Enzymes [BR:
mku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I2456_09510
Messenger RNA biogenesis [BR:
mku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I2456_09510
Transfer RNA biogenesis [BR:
mku03016
]
Prokaryotic type
tRNA degradation factors
I2456_09510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QPI39660
LinkDB
All DBs
Position
1997332..1999611
Genome browser
AA seq
759 aa
AA seq
DB search
MSVAEIEEGVFEATATIDNGSFGTRTIRFETGRLALQAAGAVAAYLDDDNMLLSATTASK
NPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR
NEIQVVVTVLSLDPNDLYDVLAINAASASTQLAGLPFSGPIGGVRVALIDGTWVAFPTVE
QLERAVFDMVVAGRIVGDGDQKDVAIMMVEAEATEHVIDLIDGGAQAPTEGVVAEGLEAA
KPFIAALCTAQQELADAAAKPTGDFPVFPDYGEDVYYSVASVATDELAAALTIGGKAERD
QRTNEIKTEVLERLADTYQGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALS
AEVAVVPRAHGSALFERGETQILGITTLDMMKMAQQIDSLGPETSKRYMHHYNFPPYSTG
ETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTL
ALLNAGVPLKAPVAGIAMGLVSDDVETEGGGTERRFVTLTDILGAEDAFGDMDFKCAGTK
DFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDAPDEMSPFAPRVTTIKV
PVDKIGEVIGPKGKVINGITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANPQL
PTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIA
DIDKRGKISLILVAEDDGSGAAADAGSGAATADAATVSS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctgaaatagaagaaggcgtgttcgaggcaaccgccaccatcgacaacggg
agcttcggcacccgcaccattcgtttcgagaccggccggctggcattgcaggccgccgga
gccgtcgccgcttacctggacgacgacaacatgctgctgtcggcgaccaccgccagcaag
aaccccaaagaccacttcgacttcttcccgctgacggtggacgtcgaggagcggatgtat
gccgcgggccgcatccccggttcgttcttccgtcgcgagggccgcccgtccaccgacgcc
atcctgacctgccgcctcatcgaccgcccgctgcgtccgtccttcgtcgacggcctgcgc
aacgagatccaggtcgtggtgacggtcctgagcctggaccccaacgacctgtacgacgtc
ctggcgatcaacgcggcgtcggcttccacccagctggccggcctgcccttctccggcccc
atcggcggggtccgggtggccctcatcgacggcacctgggttgccttcccgaccgtcgag
caactcgagcgcgccgtgttcgacatggtggtggccggccgcatcgtcggcgacggcgac
caaaaagatgtggccatcatgatggtcgaggcggaagccaccgagcacgtcatcgacctg
atcgacggcggcgcgcaggcgccgaccgaaggcgtcgtggccgagggcctggaggcggcc
aagccgttcatcgccgcactctgcaccgcccagcaggaactggccgacgctgcggcaaag
ccgaccggtgatttcccggtgttcccggactacggcgaagacgtctactactcggtggcc
tcggtggcgaccgacgagctggccgccgcgctgaccatcggcggcaaggccgaacgcgac
cagcgcaccaacgagatcaagaccgaggtgctcgagcggctggccgacacctaccagggt
cgcgaaaaggaagtcagcgccgcgttccgctcgctgacgaagaagctggttcgccagcgc
atcctcaccgaccacttccgcatcgacggccgcgggatcaccgacatccgcgccttgtcg
gcagaagtcgccgtggtgccgcgggcacatggcagcgcattgttcgaacgcggcgagacc
cagatcctgggcatcaccacgctggacatgatgaagatggcccagcagatcgactcgctc
ggtccggagacgagcaagcgctacatgcaccactacaacttcccgccctattcgaccggt
gagaccggccgggtcggttcgcccaagcgccgcgagatcggacacggcgcgctggccgag
cgggcgctgatgccggtgctgcccagcgtcgaagagttcccgtacgccatccgccaggtc
tccgaggcgctgggctccaacggctccacgtcgatgggctcggtgtgcgcctccacgctg
gccctgctcaacgccggtgtgccgctcaaggcgccggtggccggcatcgcgatgggtctg
gtttccgacgacgtcgaaaccgaaggtggcggcaccgagcgccggttcgtcaccctgacc
gacatcctgggcgccgaggacgcgttcggcgacatggacttcaagtgcgccggcaccaag
gacttcgtcaccgccttgcagctggacaccaagctggacggcatcccgtcacaggtcctc
gcgggcgccctggaacaggccaaggacgcgcggctgaccatcctcgaggtcatggccgag
gccatcgacgccccggatgagatgagcccgttcgctccccgggtgaccaccatcaaggtc
ccggtggacaagattggtgaggtcatcgggcccaaaggcaaggtcatcaacggcatcacc
gaagagaccggcgcgcagatctccatcgaggacgacggcaccgtgttcgtcggcgccacc
gacggtccttcggcgcaggctgcgatcgaccggatcaacgccatcgccaacccgcagctg
cccaccgtgggggagcggttcctcggaaccgtcgtcaagacaaccgatttcggtgccttc
gtctccctgttgccgggccgcgacggtctggtgcacatctccaagctgggcaagggcaag
cgcatcgccaaggtcgaggacgtggtcaacgtcggagacaagctgcgggtggagatcgcc
gacatcgacaagcggggcaagatctcgctgatcctggtcgccgaggacgacggctcgggc
gccgccgccgacgcgggttcaggagcagctacagccgatgccgcgacggtcagcagctga
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