Mustela lutreola (European mink): 131827318
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Entry
131827318 CDS
T09578
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04136
Autophagy - other
mlk04140
Autophagy - animal
mlk04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131827318 (ATG16L1)
04136 Autophagy - other
131827318 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
131827318 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlk04131
]
131827318 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
mlk03029
]
131827318 (ATG16L1)
Membrane trafficking [BR:
mlk04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
131827318 (ATG16L1)
Others
Rab GTPases of specific organelles
Auto phagosome
131827318 (ATG16L1)
Mitochondrial biogenesis [BR:
mlk03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131827318 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
KASH_CCD
TolB_like
APEH_N
Vma22_CCDC115
CCDC93_CC
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
131827318
NCBI-ProteinID:
XP_059023664
LinkDB
All DBs
Position
3:complement(170639192..170675586)
Genome browser
AA seq
623 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDIPNRHEISPGHDAAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRALSRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDPHPGSSKEVRVPTTAMYVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYVWSVLSGKVEKVLSKQHGSSINAVA
WSPSGSHVVSVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggggctccgcgccgcagactttccccgctggaagcgccacatttcggaggag
ctgaggcggcgggaccggctacagaggcaggcattcgaagagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaag
catgacatccccaacaggcatgagataagtcctggacacgatgctgcctggaatgatagt
cagctacaagagatggcccagctgaggattaaacaccaagaagaactgactgagctacac
aagaaacgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgtttgcagactatctctgac
ctggagacggagtgccaagaactacgcagtaagcttcaggaccttgaaagagccaaccag
accctgaaggatgagtatgatgccctacagatcacgtttactgccttggaggagaaactg
aggaaaactactgaagagaaccaggagctggtcaccaggtggatggctgagaaagcccag
gaagccaatcgcctaaatgcagagaatgaaaaagattcaaggaggcggcaagcccggcta
cagaaagagcttgcagaagcagcaaaggaacctctacccgttgaacaggatgatgacatt
gaagtcatcgtggacgaaacctctgatcacaccgaggagacatctcccgtgcgtgccctc
agcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcactcttctgatgctgccagg
aggcgttctgtctcttcctttccagttccccaggataatgtggatcctcatcctggttct
agtaaagaagtgagagtgccaacaacagcgatgtatgtctttgatgctcatgatggggaa
gtcaacgctgtgcagttcagtccgggctcccggctgctggccacaggaggcatggatcgg
agagttaagctttgggaagtgtttggagataaatgtgagttcaagggctccctctctggc
agtaatgcgggaattacgagcatcgaatttgacagcgctggatcttaccttttagcagct
tcaaatgattttgcaagtcgaatctggactgtggatgattatcggttacggcacactctc
acaggacacagtggcaaagtgctgtctgccaagttcctgctggacaacgcgcgtattgtt
tccggaagtcatgaccggaccctcaagctctgggatctccgcagcaaagtctgcataaag
acggtgtttgcaggatccagctgcaacgatatcgtttgcacggagcagtgtgtcatgagt
ggacattttgacaagaaaattcgtttctgggacatccgatcagagagcatcgtccgggag
atggagctgctgggcaagattaccgccctggacttaaacccagagagaacagagcttctc
agctgctctcgtgatgacctgctgaagatcattgatctgcggatcaatgctgtcagacag
acatttagcgcgcctgggttcaaatgcggctctgattggactagagttgtattcagccct
gatggtggttatgtggcagcgggctcagctgagggctccctctacgtctggagcgtgctc
tcggggaaggtggagaaggtcctttccaagcagcacggctcgtccatcaatgcggtagca
tggtccccttctggctcccatgtcgtcagtgtggacaaaggaagcaaagctgtgctgtgg
tcagagtattga
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