KEGG   Mesorhizobium loti NZP2037: A9174_00375Help
Entry
A9174_00375       CDS       T04711                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mln  Mesorhizobium loti NZP2037
Pathway
mln03030  DNA replication
mln03410  Base excision repair
mln03420  Nucleotide excision repair
mln03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mln00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    A9174_00375
   03410 Base excision repair
    A9174_00375
   03420 Nucleotide excision repair
    A9174_00375
   03430 Mismatch repair
    A9174_00375
Enzymes [BR:mln01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A9174_00375
    6.5.1.6  DNA ligase (ATP or NAD+)
     A9174_00375
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     A9174_00375
DNA replication proteins [BR:mln03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    A9174_00375
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     A9174_00375
DNA repair and recombination proteins [BR:mln03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A9174_00375
   NER (nucleotide excision repair)
    Other NER factors
     A9174_00375
   MMR (mismatch exicision repair)
    Other MMR factors
     A9174_00375
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID: ANN55393
LinkDB All DBs
Position
79540..81141
Genome map
AA seq 533 aa AA seqDB search
MNRFAELLDRLVLTPSRNGKLTLLVDYFRTVEDPDRGLALAAITGDLTIAAIKPAMLRML
VTERMDPVLFGYSYDYVGDLAETVSLVWPRTPGKIPNREPTLGEVVAKLQAASRSDGPKV
LASLLDSAGISARFAIIKLVTGGLRIGVSARLAKQALADFGKVDVAEIEELWHGLSPPYT
ALFAWLEGKAEKPRNTAMALFRPVMLSNPVGDGDLEKLDPADYAAEWKWDGIRVQAVAEG
GIRRLYSRTGDDVSGAFPDLADAMHFSATLDGELLVGDPREATGTFSDLQQRLNRKTVSP
KMQQQYPAFMRCYDLLQLGDEDLRALPFRERRGRLETFVKTLDPGRFDLSPFVAFTDWQA
LENLRRAPPHPIIEGVMLKRWDSPYVAGRPKGPWFKWKRDPHTVDAVLMYAQRGHGKRSS
FYSDYTFGVWSGAEGEEELVPVGKAYFGFTDEELKQIDKYVRDNTVERFGPVRSVRADRD
NGLVLEVAFEGLNRSTRHKSGVAMRFPRISRLRWDKPANEADRIETLQALLDR
NT seq 1602 nt NT seq  +upstreamnt  +downstreamnt
atgaaccgcttcgccgaacttctcgaccgccttgtgctgacgccgtcgcgcaacggcaag
ctgacgctgctggtcgactatttccgaaccgtcgaggatccggatcgcgggctggcgctg
gcggccatcaccggtgacctcacaatagccgcgatcaagccggccatgctgcgcatgctg
gtcacagaacggatggatcccgtgctgttcggctactcctacgactatgtcggcgatctc
gccgaaacggtgtcgctggtctggccgcggacgccgggcaagatccccaaccgcgagccg
acgctcggcgaggtcgtggccaaactgcaggcggcaagccgctcggacggaccgaaagtg
ctggccagcctgctcgacagcgccggcatttcggcgcgcttcgccatcatcaagctggtc
accggcggcctgcgcatcggcgtctcggcgcggctcgccaaacaggcgctggcggatttc
ggcaaggtcgacgtcgccgaaatcgaggagctctggcacggtctgtcgccgccctatacg
gcgctgttcgcctggctggaaggcaaggccgaaaaaccccgcaacacggcgatggcgctg
ttccgcccggtgatgctgtcgaacccggtcggcgacggcgatctcgaaaagctcgacccg
gcggattacgccgccgaatggaaatgggacggcatccgcgtccaggcggtggcggaaggc
ggcatccgccggctctattcgcgcaccggcgacgatgtctccggcgcctttcccgacctc
gcagacgccatgcacttttccgcgacgctggacggcgagttgctggtcggcgatccgcgt
gaggcgacggggaccttctcggatttgcagcagcggctgaaccgcaagacggtgtcgccg
aagatgcagcagcaatatccggccttcatgcgttgctacgacctgcttcagctcggcgac
gaagaccttcgcgcattgccgttccgggaacggcgtggccgcctcgaaaccttcgtgaaa
acgctcgaccccggccgtttcgacctgtcgcccttcgtcgccttcacggactggcaggcg
ctggagaacctgcgccgcgcgccgccgcacccgatcatcgaaggcgtgatgctgaagcgc
tgggattcgccctatgtcgccggccggccgaaaggcccgtggttcaagtggaagcgcgat
ccgcacacggtggacgcggtgctgatgtatgcccagcgcggccatggcaagcgctcgagt
ttctactccgactacacgttcggcgtctggtccggagccgagggcgaggaggaactggtg
ccggtcggcaaagcctatttcggcttcaccgacgaagaactgaagcagatcgacaaatat
gttcgggacaacacggtcgagcgcttcggaccggtgcgttcggtgcgggcggaccgtgac
aacggcctggtgctggaagtcgccttcgaggggctcaaccgctccacccggcacaaatcc
ggcgtcgccatgcgctttccccgcatttcacggctgcgctgggacaagccggccaacgaa
gccgaccgcatcgagacgctgcaggcgctgctcgaccgctga

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