Mycobacterium marinum E11: MMARE11_44960
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Entry
MMARE11_44960 CDS
T04774
Symbol
ercc3
Name
(GenBank) DNA helicase Ercc3
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MMARE11_44960 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
MMARE11_44960 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmae03021
]
MMARE11_44960 (ercc3)
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_44960 (ercc3)
Enzymes [BR:
mmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMARE11_44960 (ercc3)
Transcription machinery [BR:
mmae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MMARE11_44960 (ercc3)
DNA repair and recombination proteins [BR:
mmae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MMARE11_44960 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CDM78633
LinkDB
All DBs
Position
5431002..5432651
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVTHSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLISLDRAVLEEVL
RNKKIAPMLGARIDDDTVIVHPSERGRVKQLLLKIGWPAEDLAGYVNGEAHSISLQPDGW
ELRDYQELATDSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNIVAARQWKRE
LVARTSLTEEEIGEYSGERKEIRPVTISTYQMITRRSKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDSERMTYATAEPEERYRLCSTVHTKIAVVKSILHKHPGEQTLVIGAYLD
QLEELGTELDAPVIQGATKTREREALFDAFRRGEIATLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKSDGGGAMFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggacccctgatcgtgcaatccgacaagacggttctgctcgaggtcgaccac
gagcaggccggtgccgcacgcgcagccatcgcgccgttcgccgagctcgagcgcgcgcca
gaacacgtgcacacctaccggatcacaccgctggccctatggaacgcccgggcggccggc
cacgacgccgagcaggtggtcgacgcgctggtcacccactcgcgctacgcggtaccccag
cccctgctcgtcgacatcgtcgacaccatggcccgctatggccggctgcaactggtcaag
caccctgcgcatggtttgacgctgatcagcctggatcgggccgtgctcgaagaagtgctg
cgcaacaagaagattgcgccgatgctgggcgcccgcatcgacgatgacaccgttatcgtc
caccccagcgagcgaggccgggtcaagcagctgctgctcaagatcggttggcccgcggaa
gatctcgccggctacgtgaacggcgaggcacattcgatcagcctgcagcccgacgggtgg
gagctgcgcgactaccaagagctggccaccgactccttctgggccggcggttccggcgtg
gtggtgctgccgtgtggggcgggcaagacactggtcggcgcggccgcaatggccaaggcc
caggcgaccacgctgatcctggtcaccaacatcgtcgccgcgcggcagtggaaacgcgaa
ctggtggcccgcacttcgctcaccgaggaagagatcggcgagtactccggagaacgcaag
gaaattcggccggtcaccatctcgacctaccagatgatcacccgccgctccaagggcgaa
taccgccacctcgagctcttcgacagccgcgactggggcctgatcatctacgacgaggtg
catctgctgccggcaccggtgttccggatgaccgccgacctgcagtccaagcggcgactg
ggcctgaccgcgacgctgatccgcgaagatggccgcgagggcgacgtcttctccctcatc
ggccccaagcgctacgacgcgccgtggaaggacatcgaagcgcagggctggatcgccccg
gcggagtgtgtcgaagtccgggtcaccatgaccgacagcgaacgcatgacgtacgccacc
gccgagcccgaagagcgctaccggctgtgctcgacggtgcacaccaagatcgctgtggtg
aagtcgattctgcacaagcaccccggcgagcaaaccctggtgatcggggcctacctggat
caactcgaagagctgggcaccgaacttgatgctccggtcatccagggagcgacaaaaact
cgggaaagagaggcgctgttcgacgccttccggcgtggcgagatagccaccctggtggtg
tcgaaggtcgccaacttctccatcgacttgccggaggcctctgtggcggtgcaggtttcg
gggacctttggctcgcgccaggaggaagcacagcggttgggccggttgctgcgccccaag
tccgacggcggtggcgcaatgttttattcggtggttgcccgcgacagcctggacgccgaa
tacgccgcacaccggcaacgattcctggccgagcagggctatggctacatcatccgcgac
gccgacgacctgttgggcccggcgatctag
DBGET
integrated database retrieval system
