Methylocaldum marinum: sS8_5228
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Entry
sS8_5228 CDS
T05638
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmai03016
]
sS8_5228
Enzymes [BR:
mmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
sS8_5228
Transfer RNA biogenesis [BR:
mmai03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
sS8_5228
Prokaryotic type
sS8_5228
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
BBA37150
UniProt:
A0A250KZT9
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All DBs
Position
5639866..5640897
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AA seq
343 aa
AA seq
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MKPVFHPELINDVFGDPAVYVDFLFEKRALLFDLGDLRNLATRKILRIRDVFVSHAHMDH
FFGFDWLIRLCLGREMRIRLFGPARFLGQVEARLAGYTWNLVENYDTDFTLDATEVLSDT
RARSARFRCRTGFRRENERELALSDGVLLDEENLTVRFCLLDHKIPCLGFALQEKLHVNI
WKNRLDELDLEPGPWLQGFKRAVLHGLPGNTPMAARRRGGDETTYRLDDLAGTIAHISTG
QKVAYVTDAVFHPANAERIVGLGKGADQFFIEAVFGDELAERAARKFHLTAAQAGSLARC
AKAKFPVPFHFSPIYHDRENELREEFERAFRGQLNPSPLQQGL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggtgttccatcccgagctgatcaacgacgtgttcggcgatccggcggtttat
gtcgattttctgttcgaaaagcgcgccttgttgttcgatttgggcgatttgcggaatctg
gcgacgcggaaaattctgcggattcgggatgtgttcgtttctcacgcgcacatggaccat
tttttcggattcgattggctgatacggctctgcctcgggcgggaaatgcgcatacgtctg
ttcgggccggcccggtttctcggacaagtggaagcccggcttgccggctatacctggaat
ctggtggaaaactacgacacggattttacgttggatgcaaccgaggtgttgagtgatacc
cgagcacgatccgcccgttttcgctgtcgaaccggatttcggcgggaaaacgagcgcgaa
ctggcgttaagcgacggcgtgttgctcgacgaagagaatctcacggtccgattctgcctt
ttggatcacaagatcccgtgtcttggctttgctctccaggaaaagctgcacgtcaatatc
tggaagaaccgcctggacgagctggatctcgagcccggtccctggcttcaagggttcaag
cgggccgtcctccacggactgcccggcaatacgccgatggccgcccggcggcgcggaggg
gatgaaacgacgtatcggctggacgatctggccggaaccatcgcgcacatctccacgggg
cagaaagtcgcttatgtgaccgatgccgtttttcacccggccaatgccgaacgcatcgtc
ggattgggcaagggggccgaccagttcttcatcgaggcggtattcggcgacgagctcgcc
gagcgcgccgcccggaagtttcacctgaccgctgctcaggcgggaagcctggcccgctgc
gccaaggccaaattcccggtgccgtttcatttttcgccgatttatcacgaccgtgaaaat
gagcttagagaagagttcgagcgggcgtttcgcgggcaactcaatccatcgcctttgcaa
caaggtctttaa
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