Mycobacterium marseillense: CKJ54_18700
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Entry
CKJ54_18700 CDS
T05049
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmal
Mycobacterium marseillense
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmal03032
]
CKJ54_18700
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_18700
Enzymes [BR:
mmal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CKJ54_18700
DNA replication proteins [BR:
mmal03032
]
Prokaryotic type
DNA Topoisomerases
CKJ54_18700
DNA repair and recombination proteins [BR:
mmal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKJ54_18700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ASW91667
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All DBs
Position
4005969..4007018
Genome browser
AA seq
349 aa
AA seq
DB search
MRLRRSVLSKPGIARKRRGKGFAYYDPDGAAVSDPETLQRIKDLVIPPAWKKVWISPYPN
GHIQAVGVDAAGRRQYLYHSAWQQERAEEKFDRVLELSTRLPAWREAIAKDLARQGLTRK
RVLALALRLLDRGYFRAGGEQYAEEHESYGLSTLLCEHVVVRRDAVEFDFPAKSGVRRTV
EIEDADVVRAVRALMRRPSRTERLLVCRNASGWIDVRADDLNARFKELAGDDYTVKDLRT
WHGTVLAAAAFADADPAVSGRVAKRVVSAVMKEVAEELGNTPAVARGSYVDPRVVDGYEQ
GLTIAAAARRAERARKPDVAQEILDKATRALIRRVAKADSASPALRKTA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcgtcgcagcgtgttgagcaagcccgggattgcgcgcaaacgtcgcggcaag
ggcttcgcctactacgacccggatggcgcggcggtttccgatccggaaacactgcaacgc
atcaaggatctcgtcattccgccggcgtggaagaaggtctggatctcgccgtaccccaac
ggccacatccaggcggtcggcgtcgacgcggccggccgccgccagtacctttaccactcc
gcctggcagcaggaacgcgccgaggagaagttcgaccgcgtgctggaactgtcgacgcgg
ctgcccgcgtggcgcgaagcgatcgccaaagaccttgcccgccaaggcttgacccgcaag
cgggtgctggcgctcgcgctgcggctgctcgatcgcggctacttccgcgccggcggcgag
caatacgccgaggaacacgagtcctacgggttgtccaccctgttgtgtgaacatgtcgtg
gtccggcgtgacgccgtcgaattcgactttccggccaagagcggggtccggcgcaccgtg
gaaatcgaggacgccgacgtggtccgggcggtgcgcgcgttgatgcgccggcccagccgc
accgaacgcttgctggtgtgccgcaacgcttccgggtggatcgatgtgcgcgccgacgac
ctcaacgcccgattcaaagagttggccggcgacgactacaccgtcaaggacctgcgcacg
tggcatggcacggtgctggcggccgcggccttcgccgacgccgaccccgccgtgtcgggc
cgggtcgccaagcgcgtcgtgtccgccgtgatgaaagaggtggccgaggagctgggcaac
acgccggcggtggcccgcggttcctacgtcgatccccgcgtcgtcgacggctatgagcag
ggattgaccatcgccgcggcggcccgccgcgccgagcgcgcccgcaagcccgacgtggcc
caggagattctggacaaggccacgcgggcgctgatccggcgtgtggccaaggccgacagc
gcctcgcccgccctgcgcaagacggcgtga
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