Modestobacter marinus: MODMU_5459
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Entry
MODMU_5459 CDS
T02167
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmar
Modestobacter marinus
Pathway
mmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MODMU_5459 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmar03019
]
MODMU_5459 (recQ)
03400 DNA repair and recombination proteins [BR:
mmar03400
]
MODMU_5459 (recQ)
Enzymes [BR:
mmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MODMU_5459 (recQ)
Messenger RNA biogenesis [BR:
mmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MODMU_5459 (recQ)
DNA repair and recombination proteins [BR:
mmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MODMU_5459 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
CCH90832
UniProt:
I4F5B9
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All DBs
Position
5429941..5431608
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AA seq
555 aa
AA seq
DB search
MRTRRIRETARDVLGFTEFRPGQEAAMQAVAAGRDTLAVLPSGAGKSAVYTVAGLLLDGP
VVIVSPLIALQRDQVQRLEELGEDAVGRAAVLNSGLSVLEHQAVLDGMRDGTVRFVFLAP
EQLAKAEVVEAIRTAAPALFVVDEAHCVSAWGHDFRPDYLRLGGVVQQLGHPTVLALTAT
AAPPVRAEILERLEMVDPAVVVAGFDRPEIRLEVEHHADAQHKHHAVLDKVSDLSRQGIG
ILYSATRKGTEEFAAALTGRGLRAAAYHAGLKKSDREEVQRQFMDDELDVVVATTAFGMG
IDKPETRFVVHAEPADSVDSYYQEIGRAGRDGEPAVAVLVYRQEDLGIRKFFAAGAPAEE
ELQEVAGLVQAGVAAGLDGVDVTELREETGRPATPLVRDLNLLEQAGAVVLDDEGAASPA
PGGPAPGEAAAAARELAEQHTKVDESRIEMMRGYADTTRCRRQYLLGYFGEQLDEPCGNC
DTCSSGSAYEHADAVVDGDHPFPVDTAVEHTEWGPGVVMRHEEDRVVVLFEQVGYKTLGL
QAVLDHHLLSERAGA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcacccgccggatccgggagaccgcccgcgacgtcctggggttcaccgagttccgc
ccgggccaggaggccgccatgcaggcggtggccgcggggcgggacaccctggccgtgctg
ccgtcgggcgcgggcaagtccgccgtctacacggtcgccggcctgctgctcgacggcccg
gtcgtcatcgtctcgccgctcatcgccctgcagcgggaccaggtgcagcgcctggaggag
ctcggcgaggacgcggtcggccgggccgcggtgctcaactccgggctgtccgtgctggag
caccaggcggtgctcgacggcatgcgtgacggaacggtccgcttcgtcttcctcgcccct
gagcagctggccaaggccgaggtcgtcgaggccatccggacggcggcgccggcgctgttc
gtcgtcgacgaggcgcactgcgtctccgcctggggccacgacttccgcccggactacctg
cggctcggcggcgtggtgcagcagctcgggcacccgacggtgctcgccctgaccgccacc
gcggccccgccggtgcgggccgagatcctcgagcggctggagatggtggacccggcggtc
gtcgtcgccgggttcgaccgcccggagatccggctggaggtggagcaccacgccgacgcc
cagcacaagcaccacgctgtcctggacaaggtctccgacctgagccggcagggcatcggc
atcctctacagcgccacccgcaagggcaccgaggagttcgccgcggcgctcaccggccgg
gggctgcgcgcggcggcgtaccacgcggggctgaagaagagcgaccgcgaggaggtgcag
cggcagttcatggacgacgagctggacgtcgtcgtggccaccaccgcgttcggcatgggc
atcgacaagccggagacccgcttcgtcgtgcacgccgagcccgccgactcggtcgacagc
tactaccaggagatcggccgggccgggcgggacggtgagccggcggtcgccgtcctggtc
taccggcaggaggacctgggcatccggaagttcttcgccgccggcgcacccgccgaggag
gagctgcaggaggtcgccggcctggtgcaggccggtgtcgcggccggcctggacggcgtc
gacgtcaccgagctccgcgaggagaccggccggcccgccaccccgctggtgcgcgacctc
aacctgctcgagcaggccggggccgtcgtcctcgacgacgagggggcggcgtccccggca
ccgggcggacccgcgcccggggaggccgccgcggccgcccgcgagctcgccgagcagcac
accaaggtcgacgagagccggatcgagatgatgcgcggctacgccgacaccacccgctgc
cgccgccagtacctgctcggctacttcggcgagcagctcgacgagccctgcggcaactgc
gacacctgcagctcgggctccgcctacgagcacgccgacgcggtcgtcgacggcgaccac
ccgttcccggtggacaccgccgtcgagcacaccgagtggggccccggcgtggtcatgcgg
cacgaggaggaccgcgtcgtcgtcctgttcgagcaggtcggctacaagacgctggggctg
caggccgtgctggaccaccacctgctcagcgagcgcgccggggcctga
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