Corallococcus macrosporus DSM 14697: MYMAC_001094
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Entry
MYMAC_001094 CDS
T05096
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mmas
Corallococcus macrosporus DSM 14697
Pathway
mmas02020
Two-component system
mmas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYMAC_001094
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYMAC_001094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmas03021
]
MYMAC_001094
Transcription machinery [BR:
mmas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYMAC_001094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ATB45509
UniProt:
A0A250JNR5
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Position
1309931..1311448
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AA seq
505 aa
AA seq
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MAMELKQSLKLAQQLVMTPQLQQAIKLLQLSRMELLEQVREEMEQNPLLEQPDEQAPGDV
GDKEPGEASLEADNMELPRDGDMPAATSDTATEFKADGEGPPEIDWEQYLNSYQFNEPTT
ASNKGNVATDDMPSFEANLVKKEDLVDHIQEQLGTLRLNDAERRIAMLILGNLDDDGYLK
LPEVDGDPLIRLANEADVPMHVAERTLRRIQMLEPRGCGARDLQECLLIQLQAMKEPQAP
LLGLIIKRHMKYLESKNLPAIAKDLKVTLEEVVEAVRLLPKLDPKPGRNFSGDDAQYISP
DVFVYKMGDEYTVVLNDDGLSKLRISGTYRNALKTGAVGPGQTKDFIQDKLRSAMWLIRS
IHQRQRTIYKVTESIVKFQRDFLDKGIAHLKPLILRDVAEDIGMHESTVSRVTTSKYVHT
PQGIFELKYFFNSSIARVSGEDTASEAVKHHIKQLVSQEDARNPYSDQKIVELLRSQGTE
IARRTVAKYREVLGILPSSKRKRYY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaactgaaacaaagcctgaagcttgcccagcagctggtgatgacgccgcag
ctgcagcaggccatcaagctcctccaactctcccgcatggagctgctcgagcaggtccgc
gaggagatggagcagaacccactgctggagcaaccggacgagcaggccccgggagacgtg
ggagacaaggaacccggtgaagcctccctggaggcggacaacatggagctgccgcgggac
ggggatatgcccgcggccaccagcgacaccgccacggagttcaaggcggacggggagggc
cccccggaaatcgactgggagcagtacctcaacagctaccagttcaacgagcccaccacg
gcctccaacaagggcaacgtggccacggacgacatgccgtcgttcgaggccaacctcgtc
aagaaggaggacctggtcgaccacatccaggagcagctcggcacgctgcgcctgaatgac
gccgagcgccgcatcgccatgctcatcctgggcaacctggatgacgacggctacctcaag
ctgccggaggtggatggcgaccccctcatccgcctggccaacgaggcggacgtgcccatg
cacgtcgcggagcgcacgctgcgccgcatccagatgctggagccgcgtggctgtggcgcg
cgtgacctgcaggagtgcctgctcatccagctccaggccatgaaggagccgcaggcgccg
ctcctgggcctcatcatcaagcggcacatgaagtacctggagagcaagaacctgcccgcc
atcgccaaggacctgaaggtcaccttggaagaggtggtggaggcggtgcggctgctcccg
aagctggacccgaagccgggccgcaacttcagcggggatgacgcgcagtacatctccccc
gacgtgttcgtctacaagatgggggacgagtacacggtggtgctcaacgatgacggcctg
tccaagctgcgcatctccggcacctaccggaacgcgctgaagacgggcgcggtgggtcct
ggccagacgaaggacttcatccaggacaagctgcgcagcgccatgtggctcatccgctcc
atccaccagcggcagcggaccatctacaaggtcaccgagagcatcgtgaagttccagcgg
gacttcctggacaagggcatcgcccacctcaagccgctcatcctccgggacgtggccgag
gacatcggcatgcacgagtccacggtgagccgcgtcaccaccagcaagtacgtgcacacg
ccgcagggcatcttcgagctgaagtacttcttcaactcgtccatcgcccgcgtctccggt
gaggacaccgcgagcgaggcggtgaagcaccacatcaagcagctcgtgtcgcaggaggac
gcgcgcaacccgtactcggaccagaagatcgtcgagctgctgcgctcgcagggcaccgag
attgcccgccgcacggtggccaagtaccgcgaggtgctgggcatcctccccagcagcaag
cgcaagcggtactactga
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