Methanohalophilus mahii: Mmah_1472
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Entry
Mmah_1472 CDS
T01211
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmh
Methanohalophilus mahii
Pathway
mmh03410
Base excision repair
mmh03430
Mismatch repair
mmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mmah_1472
03430 Mismatch repair
Mmah_1472
03440 Homologous recombination
Mmah_1472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmh03400
]
Mmah_1472
DNA repair and recombination proteins [BR:
mmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mmah_1472
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mmah_1472
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mmah_1472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ADE36970
UniProt:
D5E732
LinkDB
All DBs
Position
complement(1467481..1468776)
Genome browser
AA seq
431 aa
AA seq
DB search
MASEKISEYSRVRLISHNDADGITAAAVMCHALLREDIVFHASIVSRLDENVVETVNNST
DNGDLVLFCDMGSGQPELIEKVKNDTIIIDHHAPVGETTAYVMVNPHLADIDGAYYMCAS
TTAYVVATEMNPENKELAGLAIAGAIGDKQLFDRENGLILKEGIESGSVSIRKGLKIGDG
ELAEVLERTPEPYLDITGEKEKIANFLNILGISGPIEELDENQMKKLTSAVALKLTKKAS
PEAIDASIGEVCILNHEAIPNVYDMVTLLNCCGKLERGGLALTACLRDKKAAEEGWKLAE
QYQKVLMGQIKKAEKKVQKRQHLRYIQGEDMEATGMIAGVVIRYIHPDLPFIALNKVDDV
VKISGRGTRKLVDSGLDLAVALREAASGVGGNGGGHNIASGAAIPPGSEEEFLEALDTII
AKQMGNNADEN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgaaaaaatcagtgaatactcacgtgtaagactcatatcccataatgatgca
gacgggattaccgcagcagctgtaatgtgccatgccctgctgagagaagacatagttttc
catgcaagcattgtaagccggctggatgaaaatgttgtggaaacagttaacaacagcact
gataatggtgatctcgtacttttctgtgacatggggagcggccagcctgaattgattgaa
aaagtcaaaaatgacaccattataatagaccatcacgcacccgtgggtgaaacaacggca
tatgtaatggtaaaccctcatcttgcagacatagatggtgcttattatatgtgcgcctca
acaactgcttatgtggtcgcaacagaaatgaatcccgaaaataaagagcttgcaggactt
gcaattgcaggtgctataggggataaacaactttttgacagggaaaatggcctgattctg
aaagaaggaattgaaagcggctctgtttccataaggaaagggttaaagatcggagatggt
gagctggcagaagtgctggaaagaacacctgaaccctacctcgacataacaggtgaaaaa
gaaaagatcgcaaacttccttaatatcctgggtatcagtggcccaatcgaagaacttgat
gaaaaccagatgaaaaaactgacttctgcagttgcacttaagctgacaaaaaaagccagt
cctgaagccattgatgccagcatcggtgaagtctgcatcctcaatcatgaggcaataccg
aatgtttacgatatggtaactctcctcaattgttgtggcaaacttgaacgtggcggtctt
gcccttactgcctgtctgagggacaaaaaggctgcagaagaaggctggaaacttgcggaa
caataccaaaaagttttgatgggacaaatcaaaaaggcagagaaaaaggttcaaaaacgg
cagcatctcaggtatattcagggagaagacatggaagccacaggtatgatcgcaggtgtt
gttatcaggtacatacaccctgatctgcctttcattgccctgaacaaagttgacgatgtt
gttaaaatttcaggaagaggaacccgcaaacttgtagacagcggactggatcttgcagtt
gccttaagagaggcagcatccggagtaggaggtaacggagggggacataacatagcatca
ggtgcagctatacctccgggaagtgaagaagagttcctggaagccctggatactattatc
gcaaaacagatgggaaacaatgcagatgaaaattaa
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