Mycoplasma mobile: MMOB2650
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Entry
MMOB2650 CDS
T00176
Symbol
vacB
Name
(GenBank) vacb-like ribonuclease II
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mmo
Mycoplasma mobile
Pathway
mmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMOB2650 (vacB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmo03019
]
MMOB2650 (vacB)
03016 Transfer RNA biogenesis [BR:
mmo03016
]
MMOB2650 (vacB)
Enzymes [BR:
mmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MMOB2650 (vacB)
Messenger RNA biogenesis [BR:
mmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MMOB2650 (vacB)
Transfer RNA biogenesis [BR:
mmo03016
]
Prokaryotic type
tRNA degradation factors
MMOB2650 (vacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
Motif
Other DBs
NCBI-ProteinID:
AAT27751
UniProt:
Q6KI25
LinkDB
All DBs
Position
complement(315284..317410)
Genome browser
AA seq
708 aa
AA seq
DB search
MFNKEKVLSLLKEKKYSFIEIVQKIEVPKFKNKDFSNFLFDLVKSGEIFKDRDNNYYMPK
FLGEFNGTISINSKGFGFVDFEDDKKDSVFVSKFNLNGSFNGDLVSVKSYCESNEAEKQK
CFGVISKIIKRNTQYLVGWSFLENGKMKFKAFDEKYNVTQFLFLDNVTNLKENTLIKVRI
VEFNKMSSIVQIVKTIGHLNNPYDEVALVIEESDIVTEFNENTLIESANIPQSISREKEE
INNRRDYREKLIVTIDGDDTKDFDDAILVEKKGDNFILSVHIADVSYYVKENSPIDLEAL
SRGTSIYLADRVIPMLPESLSNGICSLNPNVDRFTMGIEMEIDEKGRTIRSEIFPSIINS
KKRLTYKEVNRFYNNEISFDDVPNLNEMLNTSLELSNILQKFKIADGYVDFEIEEPKVIL
DKDGRVERIDVRERGLSEVLIENFMVRANEEVATFLAKNKIPTLYRIHEKPDNLKISKLN
GIIKTLNINAFFQSGNDSLKFSKTLNKLKDQRFDNFIKILILRSMQKAKYSPNNVGHFGL
GSKFYLHFTSPIRRYPDLLTHRIIREIIFKNQKDKISSFNAILKRIGEMNSESENKAVEL
ERNVIDIKKAEFYESKIGKNFVGIVVSILPFGFFVEFENKVDVLIHKDNIVDAYKINEEG
TKIILKDKTILIGDQVNVTIIGTNRLARKIDAILTENYNHWKTINSKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaggaaaaagttttaagtcttttaaaggaaaaaaaatactcttttattgaa
attgtgcaaaaaattgaagttcctaaattcaaaaataaggattttagtaattttttattt
gacttagttaaatcaggagaaatttttaaagatagagataacaactattacatgccaaaa
tttttaggtgaatttaatgggactatttcaatcaattcaaaaggatttggatttgttgat
tttgaagatgataaaaaagatagtgtttttgtatctaaatttaatttgaatggatctttt
aatggggatttagtttcagtcaaatcttattgtgaatcaaatgaagccgaaaaacaaaaa
tgttttggtgtaatttcaaaaataattaaaagaaacactcaatatcttgtgggttgaagt
tttttagagaacggaaaaatgaaatttaaagcttttgatgaaaaatataatgtaacacaa
ttcttatttttagataatgttactaatttaaaagaaaatacattaattaaagttagaatt
gttgaatttaataaaatgagttctattgttcaaattgtaaaaacaattggacatttgaat
aatccttatgatgaagtagcattagtaattgaagaatcagatatagttactgaattcaat
gaaaatacattaattgaatcagcaaatattcctcaaagtatttctagagaaaaagaagaa
attaataatagaagagactatagagaaaaattgattgttacaattgatggggatgataca
aaagattttgatgatgcaattttagtggaaaaaaagggagataattttattttaagtgtt
catattgcagatgtaagttattatgttaaagaaaatagtccaattgatttagaggccctt
tctagaggtacttcaatttatttagctgatcgtgttatcccaatgttaccagaatctctt
tctaatggtatttgttctttaaatccaaatgttgatcgatttacaatgggtattgaaatg
gaaattgatgaaaaaggtagaacaattagatctgaaatatttccttcaattattaacagt
aaaaaaagattgacatataaagaagttaatagattttataacaatgaaatttcttttgat
gatgtcccaaatttaaatgaaatgttaaatacttctttagaattatcgaatattttgcaa
aaatttaaaattgcagatggttatgtagattttgaaattgaagaacctaaagttatttta
gataaagatggaagagtagaaagaatagatgttagagaaagaggtttatctgaagtttta
attgaaaatttcatggttagagcaaatgaagaagttgcaacttttcttgctaaaaacaaa
ataccaactttatacagaattcatgaaaaacctgataatttaaaaatcagtaaattaaat
ggaattataaaaactttaaatattaatgccttttttcaatcaggaaatgattctttaaaa
ttttccaaaactttaaataaattaaaagatcaaagatttgataattttatcaagattttg
attttaagatcaatgcaaaaagctaaatattcaccaaataatgttggtcattttggtttg
ggaagtaagttttatttacattttacttcaccaatcagaagatatccagatttattaact
catagaatcattagagaaattatttttaagaatcaaaaagacaaaataagctcttttaat
gctattttaaaaagaattggtgaaatgaattctgaaagtgaaaacaaagctgtagaattg
gaaagaaatgttatagacattaaaaaagctgaattttatgaatctaaaattggtaaaaat
tttgttggaattgttgttagcattttaccatttggattttttgtagaatttgaaaataaa
gtagatgttttaatccataaagataatatagtagatgcttataaaattaatgaagaaggc
acaaaaattattttgaaagataaaacaattttaataggtgatcaagttaatgttacaatt
attgggacaaatagactagcaagaaaaatagatgctattttaactgaaaattataatcat
tgaaaaacaattaattccaaaaaatag
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