Candidatus Methylospira mobilis: F6R98_06780
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Entry
F6R98_06780 CDS
T06248
Name
(GenBank) PAS domain S-box protein
Organism
mmob
Candidatus Methylospira mobilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
GAF_2
PAS
PAS_3
GAF
PAS_8
HisKA_3
Response_reg
HATPase_c
HATPase_c_2
PdtaS_GAF
GAF_3
Motif
Other DBs
NCBI-ProteinID:
QFY42366
UniProt:
A0A5Q0BKS3
LinkDB
All DBs
Position
complement(1539148..1543884)
Genome browser
AA seq
1578 aa
AA seq
DB search
MSAQISCILYIGDDPESLRDITETLETRGHRIAVAPYNEAGLRLALQPQPELILLDTTTA
GMDGLASCKQLKTITAAGEIPVIFLTDTYSAVSIDAHFEAGACDCLCKPLQFREAVTRIG
THLQLRNAQQQLHAGAQLLQLLIDNHPDFIVRFDTEGRFTYISPRIAASGLPADSILGRT
APEIPLPGCPEQNQALYDAVCKTIATGMPTTLEVQWPKAGGLGKFQVSHYPEFDQHGKVI
GVVGNARDTTAQTQNESRAQLLDFALDQVREAAYLIEDGSIIRYVNQEACRALGYSREEL
LSMTLFDFSPRFNDELSKKIQHDLETAGFTTLEVMHKTKDGRLFPVEINASRFIYEGKQT
RFALARDISGRKAAEEKIQRLTDLYAALSQCNQAIVRCANAEELFAQICRDAVLFGKMKM
AWIGLIEPDTGRIRPVASYGEGTEYLHDIETSADADNPLGRGPCGVVLREGKPVWCQDFL
NDPIAEPWRQCGSCHYWGSSASLPLLQDDILAGVMTVYSGSVDAFDEAARNLLIEMAMDI
SYALNRFSSETKRIQAEHALQESERRYRDIFEYCSDALFLLEATEDNRFRYIDVNPAFER
CRGLPRAQLVGKCIEETLSPELAETLNDKYRSCIASGVPVDEKIGPDLTKGKHRFYHSTA
IPVRDSSGRMHRIVGVTRDITADRQAESLETQLRHIAEVLPGLIYSVELTPDGHRRLTYA
SPRLEDVTGLSRDSWPIDYLPSVHPDDLPGHLDALDVSARMLTPWHNEFRIIHPGKGVRW
LEGRSIPQEQEDGNILWHGFLYDISERKRAHELLEIREREFRSLAENTPDHITRYDLQLR
RTYANPAAQKASWPVRKTMTDDVPRGWIEFQEMLRTVVDNETEADMDMIRIDIGGEERYH
HVRFVPEHDAHGAILGVLVIGHDITRRKLMEKALRESEQQFRTLAENAPDIIARYDRECR
RIYVNPTLRRSAGLELQQMIGKTPRENTPSSSVWAEYQSRIQAALDEGLESEMELSMADG
HGGASHYHMRFVAELGADGRPQGVLAIGRDITSRIRRERQENIRIRIFERLAQGADLVEL
LRLILEYIEEPNAKLLGSIMLAAPDGKHLHCAFGPKLPTDYLIAINDMPTGDGIGSCGTA
AWRGATVITDDLNTHPYWAPYKHLALAAGLQSCWSEPIIDSTGKVMGTFGIYQRRPAFPT
QEDLARVRRACHFAAIAIERKRMELALRESEQQFRTLAENSPDIIMRYDLECRRIYVNPA
YVYNTGISYDKAIGETPEEHWRIITNMPYKEYLAALRHVMDSGNTGKVMVEWQHPGTGEL
TSHDVQIVPEHGPDGEINGVFAIGHDISALKRTERQLQESHAMLRDLTRHREAAREEERH
RIARELHDELGQLLMALRLNVNLLLMRFGKEDTLFKEATDNLLQLVDNTIQVTRDVSTAL
RPAVLDMGIVPALEWLTHEFFRQTGITCELNTSPDDFCTQEAQAIALFRIAQETLTNAAR
HAQASRVQVTLNCTADVCQLQVEDNGVGFDTLLPRKQQSYGLMGLRERAMAVGGELTVSS
SAGSGTVVLVRIPTCAGC
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacaaatatcctgtattttgtatatcggggatgacccggaaagcctgcgagat
ataaccgaaaccctggaaacgcgaggccaccggattgccgtcgcgccatataacgaagca
ggtttgcggcttgcgttgcaaccgcagcccgaacttatcctgctggacacgacaacggcc
ggcatggatggccttgcaagctgcaaacaactcaaaacaataacggccgccggagaaata
ccggtcatctttctgaccgatacatattccgctgtatcgatagacgcgcatttcgaagca
ggcgcctgcgactgcctgtgcaaaccgctgcaattccgcgaagccgttacgcgcatcggc
acgcatctccagctgcgtaacgcgcaacaacaactgcatgcaggcgcgcagctcctgcaa
ctgctgatagacaatcaccctgactttatcgtacgtttcgataccgagggccgctttacc
tacatcagcccgcgcatcgccgcatccggcttgcctgccgattccattctgggacgtacc
gctcccgagattccgctacccggctgcccggaacaaaatcaggcgctatacgatgcggta
tgcaaaactatcgcgaccggcatgccaaccactctggaagtgcaatggccgaaggccggc
ggcctcggcaaattccaggtgagccactaccctgagtttgaccagcacggcaaggtaatc
ggcgtagtcggcaatgcgcgcgatacgaccgcgcagacacagaacgaaagccgcgcccag
ctattggactttgcgctggatcaggtgcgggaagccgcctatttgatcgaagacggctca
atcatccgttatgtcaaccaggaggcttgccgcgcgctcgggtacagtcgcgaagaacta
ctgtcgatgacgctatttgacttctccccccgttttaacgacgagctttccaagaaaata
cagcacgacctcgaaaccgcaggatttacgaccctggaagtcatgcacaaaaccaaggac
ggccgcctgttccctgtcgagatcaatgcctcgcgcttcatctacgaaggcaaacaaacc
cgcttcgcgctggcgcgcgacataagcggacgcaaggctgccgaagagaaaattcagaga
ctcaccgatctttacgccgcgctcagccagtgcaatcaagcgattgtgcgctgcgccaat
gcagaggagctattcgcgcaaatctgccgggacgccgtgctgttcggcaagatgaaaatg
gcctggatcggccttatagagccggataccggcaggatccggccggttgcaagttatggc
gagggcactgaatacctgcatgatattgaaacatcggcggatgccgacaaccccttggga
cgcggcccatgcggcgtagtcctccgcgagggaaaaccggtctggtgtcaggactttcta
aacgacccgatagccgagccctggcggcaatgcggctcgtgccattactggggttcatcg
gcgtctctgccgttgcttcaggatgacatcctggcaggcgtcatgaccgtctactcgggc
agcgtcgacgcatttgatgaagcagcgcgcaacctgctgattgaaatggccatggatatc
agctatgcgctgaatcgcttcagcagtgaaaccaaacgcatacaagcggaacatgcgctg
caggaaagcgagcgccgctaccgcgacatcttcgagtattgttcggacgcgctgttttta
cttgaagcgaccgaagacaaccgtttcagatacattgacgtgaacccggcattcgaacgc
tgcagaggactgccccgcgcgcagctggtaggaaaatgcatagaggaaacgctatcgccg
gagcttgccgaaacgctcaatgacaaataccgcagctgcatcgccagcggcgtccctgtg
gacgaaaaaatcggacccgacctgacgaagggcaaacaccgcttttatcactcgaccgcg
attccggttcgggatagcagcggccgcatgcaccgtatcgtcggcgtcactcgcgatatc
accgccgaccgtcaggcggaatcgctcgaaacgcaactaaggcatatcgccgaagtattg
ccgggactcatttacagcgtcgagctgacgcccgacggacacaggcgcctgacttacgca
tcgccacgcctggaagacgtgaccgggcttagccgtgacagctggccgatcgattatcta
ccctccgttcaccccgacgatctgccaggacacctcgacgccctggacgtatcggcgcgc
atgctgacgccatggcacaatgaattccgcatcattcaccccggcaagggagtgagatgg
ctggaaggccggtcgattccgcaagagcaggaagacggcaacattctttggcacggcttt
ctgtacgatatcagcgagcggaagcgcgcacacgaactactggaaatccgggaacgcgag
tttcgcagccttgcggaaaatacgccggaccacatcacccgctatgatttgcaactgcga
agaacctatgccaatccggccgcgcaaaaagcctcttggcccgtgcgcaagaccatgacg
gatgatgttccccgcggctggattgagtttcaggaaatgttgcgtaccgtggtcgataac
gaaacagaagctgatatggatatgatccgtatcgatatcggcggcgaagaacgctaccat
catgtgcgcttcgtcccggaacacgatgcgcatggcgcgatactgggcgtgctggtcata
ggacacgatatcacccgtcgcaaactcatggaaaaagccctgcgtgaaagcgagcagcag
ttccgcaccctcgcggaaaatgcgcccgacattattgcccgctacgaccgggaatgtcgc
agaatctacgtcaacccgacattacgaaggagcgcaggtctcgaattgcaacaaatgatc
ggcaagactccgcgggaaaacaccccctccagcagcgtctgggccgagtaccagtcccga
atacaagccgcactcgacgagggactggagagcgaaatggaactgtccatggccgacggt
catggcggcgcgagtcattaccatatgcgttttgtcgcagaactcggggccgacggccgc
ccccagggcgtgctggccatcgggcgcgatataaccagccgcatacgccgcgaaagacag
gaaaacatccgcattcgtattttcgaacgcttggctcaaggcgccgatttagtcgagctg
ctcagactaatcctggaatatatcgaagaaccgaacgccaaacttctaggcagcatcatg
ctggcggctcctgacggcaagcatctgcattgcgccttcgggccgaagctgccgaccgac
tatttgattgcaatcaacgatatgccaaccggcgacggtatcggctcctgcggtacggcg
gcatggcgcggagcaaccgtcattaccgatgacctgaacacccacccatactgggcgcca
tacaaacacctggcgctcgccgccgggctgcaatcgtgctggtccgaacccataattgat
tcgaccggcaaggtaatgggtactttcggcatttaccaacgccggccggccttccctact
caggaagatctggcgcgggtgcgccgcgcctgccattttgccgcgatcgccattgagcgc
aagcgcatggagctggccctccgcgaaagcgaacagcaatttcgcaccctggcggaaaac
tcgccggacatcatcatgcgttatgatctggagtgccgccgcatctatgtcaacccggcg
tatgtgtacaataccggaatttcttatgacaaggccatcggcgagacgccggaagaacat
tggcgcatcattaccaatatgccctacaaggaatacctggcggcgctacgccacgtcatg
gacagcggtaatacaggcaaagtaatggtggaatggcagcatcccggcactggcgaactc
accagccacgatgttcaaatcgtgccggaacacgggccggacggcgaaatcaacggcgta
tttgcaataggccacgatataagcgcgctcaagcgcaccgaacgccaacttcaggagtcg
cacgcaatgctgcgcgatctgacccgccacagggaagcagcgcgcgaagaagaacgccac
cgcattgcgcgcgaactgcatgacgaactcggccagctgctcatggcgttgcggcttaac
gtcaacttgctgctcatgcgcttcggcaaagaggatacgttattcaaggaagcgaccgac
aatctgctgcaactggtggataacaccatacaggtgacgcgcgacgtatcgaccgcattg
cgccctgccgtgcttgatatgggcatagtgccggcgctggaatggctgacgcacgaattt
ttccgccaaaccggcattacatgtgaattaaacacatcgccggatgatttttgcacgcag
gaagcacaggctatcgcgctgttccgcatcgcacaggaaacactgaccaatgccgcccgg
catgctcaagcgagccgggtgcaagtcacactgaactgcaccgcggatgtatgtcagttg
caagtggaagacaacggtgtcggcttcgataccctattgccgcgtaaacagcagtcctat
ggtctgatgggtctacgcgagcgtgcaatggccgtgggaggcgaactgacggtttccagc
tcagccggctccggaactgtggtgctcgtgcgcatccccacctgcgccggctgctga
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