Mus musculus (house mouse): 235040
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Entry
235040 CDS
T01002
Symbol
Atg4d, 9830134P12Rik, APG4-D, Apg4d, Atg4dl, Autl4
Name
(RefSeq) autophagy related 4D, cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04136
Autophagy - other
mmu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
235040 (Atg4d)
04136 Autophagy - other
235040 (Atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmu01002
]
235040 (Atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
235040 (Atg4d)
03029 Mitochondrial biogenesis [BR:
mmu03029
]
235040 (Atg4d)
Peptidases and inhibitors [BR:
mmu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
235040 (Atg4d)
Membrane trafficking [BR:
mmu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
235040 (Atg4d)
Mitochondrial biogenesis [BR:
mmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
235040 (Atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
235040
NCBI-ProteinID:
NP_705811
MGI:
2444308
Ensembl:
ENSMUSG00000002820
UniProt:
Q8BGV9
LinkDB
All DBs
Position
9:21176496..21186133
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AA seq
474 aa
AA seq
DB search
MNSVSPAAAQYRSGSSEDARRADCRRPRGQTRIPDPSNLGPSGSGVAALGSSGTDPAEPD
EVDKFKAKFLTAWNNVKYGWAVKSRTSFSKISTVHLCGRCYHFEGEGDIQRFQRDFVSRL
WLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWRWVEGTGLASSEMP
GPASPSRCRGPGRRGPPRWTQGALEMEQDRWHRRIVSWFADHPRAPFGLHRLVELGRSSG
KKAGDWYGPSVVAHILRKAVESCSEVSRLVVYVSQDCTVYKADVARLLSWPDPTAEWKSV
VILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYC
QPTVDVSQPSFPLESFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSS
VTERYPMFTVAEGHAQDHSLDALCTQLSQPTLRLPCTGRLLKAKRPSSEDFVFL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggctgcggcgcagtaccgcagcgggagctcggaggacgcgcgc
cgggccgattgtcgccggccgaggggacaaacccgtatcccggatcctagcaacctggga
ccttcggggtccggagtggcagctctcggttcatctgggacagaccccgccgagcccgac
gaggtggacaagttcaaagccaagttcctgacagcctggaacaacgtcaagtatggttgg
gcagttaaaagccggaccagcttcagcaagatctccactgttcacctctgcgggcgatgc
taccatttcgagggagagggtgacatccagcggtttcaaagggactttgtatctcgacta
tggctcacatatcgccgggacttcccaccccttgctggaggcagcctgacctcagactgt
ggctggggatgtatgttacgaagtggtcagatgatgctggcccagggcctgctcctgcat
tttctgcctagagactggaggtgggtggaaggcacaggcctggcttcctctgagatgcca
gggccagcctctcccagtcgctgccgagggcctggtcgtcgtgggcccccaagatggaca
cagggtgcactggagatggagcaggaccgttggcaccggcggattgtttcctggttcgct
gatcatccacgggcccccttcggtctacatcggctagtggagcttgggcggagctcgggc
aagaaggcaggagactggtacgggccctctgtggtggcacacatcctcaggaaagctgtg
gagagttgctcagaagtcagccgcctggtggtgtacgtctctcaggactgcacagtgtac
aaggcagatgtagcacgcctgctgtcctggccagatcctacagcggagtggaaatctgtg
gtcatcctggtgcctgtacgactgggcggggagacccttaaccctgtgtacgtgccctgt
gtgaaggagcttctgcgttcagaactctgtctgggcatcatgggcggcaagccccggcat
tcactgtacttcattggctatcaggatgactttctgctctacctggatcctcactactgc
cagcccacagtggatgtcagccagcccagcttccccctggagtcctttcactgcacctcg
ccccgcaagatggcctttgccaagatggaccccagctgtaccgtggggttctatgctggg
aacaggaaggagtttgagacactctgctcggagctgatgaggatcctcagctcctcctca
gtcacggaacggtaccccatgttcacagtggctgaaggccacgctcaggaccacagcctg
gatgccctctgcacccagctgtcccagcccacactgcggctaccttgcacaggacgacta
ctcaaggccaaaaggcccagctccgaggactttgtgtttttataa
DBGET
integrated database retrieval system
