Mus musculus (house mouse): 68916
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Entry
68916 CDS
T01002
Symbol
Cdkal1, 1190005B03Rik, 6620401C13Rik
Name
(RefSeq) CDK5 regulatory subunit associated protein 1-like 1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmu03016
]
68916 (Cdkal1)
Enzymes [BR:
mmu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
68916 (Cdkal1)
Transfer RNA biogenesis [BR:
mmu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
68916 (Cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
68916
NCBI-ProteinID:
NP_653119
MGI:
1921765
Ensembl:
ENSMUSG00000006191
UniProt:
Q91WE6
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Position
13:complement(29375729..30039665)
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AA seq
578 aa
AA seq
DB search
MPSASCDVLLDDIEDIISQEDSKPQDRQFSRKHVFPKVRRRNTQKYLQEEPRPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVER
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKAEQVPAHVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPAFMGKMVEVDIYE
SGKHFLKGQPVSETRVYTPSISKPLAKGEVSGLTKEFRNRLGNHPNGTSDTCPATQHGSA
YSRMVLQMSQYDCALKVATGLALLALLLHFWPDSLLTM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcgtcttgtgatgtactgctggatgacatagaagatatcatatcacaggaa
gattcaaagccacaggacagacagttctcaagaaagcatgtgtttcctaaagtacgaagg
cggaatacccaaaaatatttgcaagaagagcccaggccaccaagtgacagcactattcca
ggcatacagaaaatttggatccgaacatggggctgctcacataataattcggatggagaa
tacatggctggacagcttgctgcctatggctataaaattacagagaatgcatcagatgca
gatctgtggctcctgaacagttgtactgtgaaaaatccagctgaagaccactttagaaac
tcaatcaaaaaagctcaagaagagaataagaaagttgtcctcgctggctgtgttccccaa
gcccagcctcgtcaggactacctcaaaggactgagcatcatcggggttcagcagatagat
cgtgtggtagaagttgtggaggaaacaataaaaggtcactcagtgaggctcctgggccag
aagaaagacaacgggaagcgcttgggtggagctcgactggatttgccgaagatcagaaag
aatccgctgatagaaatcatttccatcaacacggggtgtctcaatgcttgtacctactgc
aaaactaaacacgccagaggaaacctggccagctatcccattgatgagcttgtggagaga
gccaagcaatcctttcaagagggtgtttgtgagatatggctgaccagcgaggacaccggg
gcctatggcagagacattggcacagatctccccacactcctgtggaagttggtggaagtg
attcctgagggagccatgctgaggctgggcatgacaaatccaccatatattttagaacat
ctggaggaaatggcaaaaatcctcaaccatcccagagtctacgctttcctccacatccca
gtgcagtccgcctctgacagtgtgctcatggacatgaagagagagtactgcgtggccgac
ttcaaaagagtcgtggattttctcaaggagaaggttcctggaataacgattgctacggat
attatctgtggttttcctggagaaaccgatcaggattttcaagaaacagtgaaacttgtt
gaagagtacaaatttccaagcctcttcatcaaccagttctatccaagacccggaactcct
gctgcaaaagccgagcaggttccagcacatgtgaaaaaacaaaggacaaaagatctttct
cgggtgtttcattcctacaatccatacgatcacaagattggcgaaagacaacaagtgcta
gtcactgaagagtcttttgactccaagttttatgttgctcataaccgattctatgagcag
gttttagtaccaaagaaccctgcattcatggggaaaatggttgaagtcgacatttacgaa
tcaggaaagcactttttgaaaggacagccagtatcagaaaccagagtgtatacaccatcc
atcagcaagccactggccaagggagaagtctcaggtttgacaaaggaattcagaaatagg
cttgggaatcatccaaacggaacttcagacacctgtcctgcaactcagcatggctctgcg
tattccagaatggtgctgcagatgtcccagtatgactgcgcactgaaggtggctacaggc
ctggctctcctcgctctccttttgcatttctggccagactctttgcttacaatgtaa
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