Methanococcus maripaludis C6: MmarC6_0456
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Entry
MmarC6_0456 CDS
T00615
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmx
Methanococcus maripaludis C6
Pathway
mmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MmarC6_0456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmx03019
]
MmarC6_0456
03009 Ribosome biogenesis [BR:
mmx03009
]
MmarC6_0456
Enzymes [BR:
mmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MmarC6_0456
Messenger RNA biogenesis [BR:
mmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MmarC6_0456
Ribosome biogenesis [BR:
mmx03009
]
Prokaryotic type
rRNA helicases
MmarC6_0456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Helicase_RecD
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABX01274
UniProt:
A9A6H8
LinkDB
All DBs
Position
complement(418045..419685)
Genome browser
AA seq
546 aa
AA seq
DB search
MESFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIP
ILETIDEGSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNIFPVYGGQSIDRQIRELKR
GVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRML
LFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSYYEIHSRDKFELLSRIIDVEK
EFYGLIFCKTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLEKFKARKINVLVATDV
AARGIDINDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFKYIQKIA
NTEIRKEEVPDVKDIIGAKKRKIVSGIKEVLESGKYNDCEKMAAELLEDADPQEVLSAVL
KYALKDELSESNYKRIGKPANREGRDRGEGRSEGRRDRGEGRRSFVSGGNVRLFVALGKL
DKMNPKKLVDHISKKSDVKGRDIDDVKVFEKFSFVTVSSDNAEIILDSFKHEKRGRRSII
EVASGN
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttttaaaaatttaggtttatctgacgagataataaaagcgttagaaaagaaa
ggtttcacaaacccaacccctattcaagaacaagcaatccctattttaattgaaggaaaa
agagacgttgtcggccaagctcaaacaggtactggaaaaaccgcagcatttggtatccct
attttagaaacaattgacgaaggctcaagaaacacacaagcacttattttagcacctacg
agagaacttgcaatacaggttgcagaagaaatcgattcaatcaaaggttcaaaaagattg
aacattttcccagtatacggcggtcagtcaattgacagacagataagagaattaaaaaga
ggagttcagattgttgttggaacccctggaagaatactcgaccacatctcaagaagaaca
ataaaactcgaaaacgtttcatacgtagttttagacgaagctgacgaaatgttaaacatg
ggattcattgacgatgtagaagaaatcttaaaatcagtaagcactgaaaaaagaatgctt
ttattctcagcaacacttcccgacagcatcatgaaacttgctaaaaactacatgagagaa
tacgacatcatcaaagttaaaagacagcagcttacaacaactttaactgatcagtcctac
tacgaaattcactcaagagataaatttgagttactttcaagaattatcgatgtagaaaaa
gagttttacggtttaatcttctgtaaaacaaaagcagacgttgatgaaatttcaagcaga
ttaacagaaaaaggatatgctgcagaaggtcttcacggagatatgacccaagcacaaaga
gaaaaaacacttgagaaatttaaagcaagaaaaatcaacgttctcgtagcaactgatgtt
gcagcaagaggaatcgatatcaacgacttaacacacgttgtaaactatgatattccacaa
aaccctgaatcatacgttcacagaattggaagaaccggaagagctggaaaacaaggttac
gcagttacatttgtagaaccttcggaatttagaaaattcaaatacattcagaaaattgca
aacactgaaatcagaaaagaagaagttccagacgttaaagacataattggagctaagaaa
agaaaaattgtttcaggaataaaagaagttttagaatctggaaaatacaacgactgcgaa
aaaatggctgctgagttattagaagatgcagatccacaagaagttctttcagcagtttta
aaatacgcattgaaagatgaattaagcgaatcaaactacaaaagaatcggaaaacctgca
aacagggaagggagagacaggggcgaaggaagaagtgaaggtagacgagacaggggcgaa
ggaagaagatcctttgtatctggcggaaacgttaggttattcgtagctcttggtaaactc
gacaaaatgaaccctaaaaagttagttgaccacatctcaaaaaaatcagatgttaaagga
agagacatcgacgatgtaaaagtatttgagaagttctcatttgtaaccgtatcttcagac
aatgcagaaataatcctcgattcattcaaacatgaaaaaagaggaagaagatcaataatt
gaagttgcaagcggcaactaa
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