Microbacterium neungamense: JSY13_04960
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Entry
JSY13_04960 CDS
T09212
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mnf
Microbacterium neungamense
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnf03016
]
JSY13_04960 (miaB)
Enzymes [BR:
mnf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JSY13_04960 (miaB)
Transfer RNA biogenesis [BR:
mnf03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JSY13_04960 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
DUF5548
Motif
Other DBs
NCBI-ProteinID:
UWF78361
LinkDB
All DBs
Position
1047710..1049260
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AA seq
516 aa
AA seq
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MTTPSSEPTIIAPSSAAIASDGRRRSYEVRTFGCQMNVHDSERLSGSLESAGYVRAAQGE
EADVVIINTCAVRDNAAGKLYGTLGHLKSRKDRHEGMQIAVGGCLAQMDKQAVLDKAPWV
DVVFGTHNMGSLPGLLERARHNGEAELEILESLETFPSTLPTKRDSAHSGWVSISVGCNN
TCTFCIVPSLRGKEKDRRPGDILNEIRLLVEDGAIEVTLLGQNVNSYGVEFGDRQAFGKL
LRAAGEIEGLERIRFTSPHPAAFTDDVIDAMAETPAVMPQLHMPLQSGSDRILRAMRRSY
RSERFLGILDRVRERIPHAAITTDIIVGFPGETDEDFEDTLRVVEQSRFSGAFTFQYSIR
EGTPAATMADQVPKEVVQERYDRLIALQERISLEENQKQVGREVEVLVSVGEGKKDAETH
RLTGRAEDNRLVHFEVTPGSEIPRPGDVVTVTVSHAAPFHLLADDPTGAPLRIRRTRGGD
AWDRAQAESCAVPAPTAAGGPRPVSLGLPTLRPVGH
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgactactccgagcagtgaaccgacgatcatcgcgccctcgtcggccgcgatcgcatcc
gacgggcgtcgccgctcgtacgaggtgcgcaccttcgggtgccagatgaacgtgcacgac
tccgaacggctgtccggatcgctcgagagcgccggctacgtccgcgccgcccagggcgag
gaagccgacgtcgtcatcatcaacacctgtgcggtgcgcgacaacgccgccggcaagctg
tacggcacgctcggccacctcaagtcccgcaaggaccgccacgagggcatgcagatcgcc
gtcggcggatgcctggcgcagatggacaagcaggccgtgctcgacaaggccccgtgggtc
gacgtcgtcttcggcacgcacaacatgggctcgctgcccggactgctcgagcgcgcccgc
cacaatggcgaggcagagctggagatcctcgagtccctggagaccttcccctccacgctg
ccgaccaagcgcgactccgcgcacagcggctgggtgtccatctccgtcggctgcaacaac
acctgcaccttctgcatcgtgcccagcctgcgcggcaaggagaaggaccgccgccccggc
gacatcctgaacgagatccgcctcctcgtcgaggacggcgcgatcgaggtcaccctcctc
ggtcagaacgtcaactcctacggcgtcgagttcggcgaccggcaggcgttcggcaagctg
ctgcgcgcggcgggagagatcgagggcctggagcgcatccggttcaccagcccgcatccg
gcggccttcaccgacgacgtgatcgacgcgatggccgagacgccggccgtgatgccgcag
ctgcacatgccgctgcagtccggcagcgaccgcatcctgcgcgcgatgcgccgctcctac
cggagcgagcggttcctgggcatcctcgaccgcgtccgcgagcgcatcccgcacgccgcg
atcaccaccgacatcatcgtcggcttcccgggcgagacggacgaggacttcgaggacacc
ctgcgggtcgtcgagcagtcgcggttctctggcgccttcaccttccagtactccatccgc
gagggcaccccggccgccacgatggcggaccaggtgcccaaggaggtggtgcaggagcgc
tacgaccgcctcatcgccctgcaggagcgcatctccctggaggagaaccagaagcaggtc
ggccgcgaggtcgaggtgctcgtctccgtcggcgagggcaagaaggatgccgagacacac
cggctcaccggccgcgccgaggacaaccggctcgtgcacttcgaggtcacgcccggctcg
gagatcccgcggcccggcgacgtggtcacggtcaccgtgtcgcacgcggcgcccttccac
ctgctggccgacgaccccaccggcgccccgctgcgcatccgacgcacccgcggcggcgac
gcctgggaccgcgcgcaggccgagtcctgcgccgtgcccgccccgaccgccgccggcggc
ccgcggccggtctccctcgggctgccgaccctccgtcccgtcggccactga
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