Mycobacterium novum: MNVM_11490
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Entry
MNVM_11490 CDS
T06926
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mnm
Mycobacterium novum
Pathway
mnm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MNVM_11490 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnm03021
]
MNVM_11490 (rpoC)
03400 DNA repair and recombination proteins [BR:
mnm03400
]
MNVM_11490 (rpoC)
Enzymes [BR:
mnm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MNVM_11490 (rpoC)
Transcription machinery [BR:
mnm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MNVM_11490 (rpoC)
DNA repair and recombination proteins [BR:
mnm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MNVM_11490 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BBX12068
UniProt:
A0A7I7JKW8
LinkDB
All DBs
Position
complement(1243849..1247799)
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDTEMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADVRRKVRDGGEREMRQLRDRAQRELDRLDNIWDTFVKLAPKQLIVDETV
YRELVDRYGEYFTGAMGAESIQKLIETFDIDAEAESLRDTIKNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYFLTTEIEGDTGEYT
PAAKDRPESGVYSSPAEAIMAVDRGALSVRAKIKVRLDQLRPPAEVETELFGENGWRPGD
AWMTETTLGRVMFNELLPVGYPFVNKQMHKKVQAVIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPRKKEILDSYEERADKVEKQFQRGALNHDERNEALVEIWKE
ATEEVGQALRDHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGILVE
LAEVAADGSLIRDPFIETSAYARTLAVDAVDEKGNVVIERGHDLGDPSIEALLGAGISQV
KVRSVLTCATGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARIPRGKAPIADVAGRVQLEEGDKFYKITIVPDDGGEEVVYDKL
PKRQRLRVFKHEDGSERLLADGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVKEVQQ
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFETENRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIPA
GTGINRYRNIAVQPTEEARAAAYTIPSYEDQYYSPDFGAATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccgcatcggcttggcgaccgcggaggacatc
cggcaatggtcctacggcgaggtcaagaagccggaaaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaaatacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtgacccgtgccaaggtgcgccgtgagcggatgggccacatcgaactggccgcgccg
gtcacccacatctggtacttcaagggcgtgccatcccggttgggctacctgctcgacctg
gcgcccaaggacctcgagaagatcatctacttcgccgcctacgtcatcaccagcgtcgac
accgagatgcgtcacaacgagctgtccacgctggaagccgagatggtcgtcgagaagaag
gccgtcgaggatcagcgcgacgcggacctggaggcccgtgcccagaagctggaggccgac
ctggccgagctggaggccgagggtgcgaaagccgatgtgcggcgcaaggttcgcgacggc
ggcgagcgcgagatgcgtcagctgcgcgaccgcgcccagcgtgagctggaccggctcgac
aacatctgggacaccttcgtcaagctggcccccaagcagctgatcgtcgatgagaccgtc
taccgtgagctggtcgaccgctacggcgagtacttcaccggtgcgatgggtgccgagtcg
atccagaagctgatcgagaccttcgacatcgacgccgaggccgagtcgctgcgcgacacc
atcaagaacggcaaggggcagaagaagcttcgcgccctcaagcggctcaaggtggtcgcg
gcgttccagcagtcgggcaactccccgatgggcatggtgctcgacgcggtgccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccggttcgccacgtccgacctc
aacgacctgtaccgccgggtcatcaaccgcaacaaccggttgaagcggctgatcgacctc
ggcgctcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacgcg
ctgttcgacaacggccgtcgtggccggcccgtcaccgggccgggcaaccgaccgctgaag
tcgctgtcggatctgctcaagggcaagcagggccggttccggcagaacctgctcggcaag
cgtgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagcttatggccctcgagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagagcgccaagcggatggtggagcggcagcgc
ccccaggtgtgggacgtcctcgaagaggtcatcgccgagcacccggtgctgctcaaccgt
gcccccacgctgcaccgcctgggtatccaggccttcgagccgcagctggtggagggcaag
gccattcagctgcacccgctggtgtgtgaggccttcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgttgagcgccgaggcgcaggccgaagcccgcatcctgatgctg
tcgtccaacaacatcctgtcgccggcttcgggtcgtccgctggccatgccgcgactggac
atggtgaccggactgtacttcctgaccaccgagatcgaaggtgacacaggcgaatacacc
ccggcagccaaggaccgtccggagagcggcgtctactcctcgcccgccgaggcgatcatg
gccgtcgaccgcggtgcactctcggtgcgcgccaagatcaaggtgcgcctggaccagctg
cggccgccggccgaggtggagaccgagctgttcggcgagaacggctggcgtcccggtgac
gcctggatgaccgagaccacgctgggccgggtgatgttcaacgagctgctgcccgtgggc
tacccgttcgtgaacaagcagatgcacaagaaggttcaggccgtcatcatcaacgacctg
gccgagcgctacccgatgatcgtggtcgcccagactgtggacaagctcaaggacgccggc
ttctactgggccacccgttcgggggtcacggtctccatggccgacgtgctggtgccgccg
cgcaagaaggagatcctggactcctacgaggagcgcgccgacaaggtcgaaaagcagttc
cagcgtggcgctctcaaccacgacgagcgcaacgaggcgctggtggagatctggaaggaa
gccaccgaggaggtgggtcaggcgctgcgtgaccactacccggccgacaacccgatcatc
accatcgtcgactccggtgcgacgggtaacttcacccagacccggacgctggccggcatg
aagggtctggtgaccaaccccaagggtgagttcatcccgcggccgatcaagtccagcttc
cgcgagggcctgacggtgctggagtacttcatcaacacccacggcgcccgaaagggtttg
gcggacaccgcgttgcgtaccgccgactcgggctacctgacgcgtcgtctggtggacgtc
tcgcaggacgtgatcgtgcgcgagcacgactgcggcaccgagcgcggcatcctggtggaa
ctggccgaggtggctgccgacggttcactgatccgcgacccgttcatcgagacctcggcg
tacgcccgcacgttggcggtcgacgccgtcgacgagaagggcaacgttgtcatcgagcgc
ggccacgacctcggcgacccgtcgatcgaggcactgctgggtgcgggtatctcgcaggtg
aaggtgcgttcggtgctgacctgtgccaccggaaccggtgtctgcgcgacctgctacggc
cggtcgatggcgaccggcaagctggtcgacatcggcgaggccgtcggcatcgtcgccgcc
cagtccatcggtgagcccggtacccagctgaccatgcgcaccttccaccagggtggcgtc
ggtgaggacatcaccggtggtctgccccgggtgcaggagctgttcgaggcgcggatcccg
cgcggcaaggcgccgatcgccgacgtcgccggacgggtgcaactcgaggagggcgacaag
ttctacaagatcacgatcgtgccggacgacggtggcgaggaagtggtctacgacaagttg
cccaagcgccagcggctgcgggtgttcaagcacgaagacggttccgagcggttgctggcc
gacggtgaccacgtcgaggtcggacagcagctcatggagggctcggccgacccgcacgag
gtgctgcgcgtgcagggcccgcgcgaggtgcagatccacctcgtcaaggaggtccagcag
gtctaccgggcccagggcgtgtcgatccacgacaagcacatcgaggtgatcgtccggcag
atgctgcgccgggtgaccatcatcgactcgggcgccacggagttcctgcccggttcgctg
accgagcgcgccgagttcgagaccgagaaccgccgggtggtggccgagggcggcgagccc
gcggccgggcgtccggtgctgatggggatcaccaaggcgtcgctggccaccgattcgtgg
ctctcggcggcgtcgttccaggagaccacccgcgtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatcccggcc
ggcaccgggatcaaccgctaccgcaacatcgcggtgcagccgaccgaggaggcccgggcc
gccgcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggcgccgcc
accggtgccgcggttccgctggacgactacgggtacagcgactaccggtag
DBGET
integrated database retrieval system
