Mustela nigripes (black-footed ferret): 132003900
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Entry
132003900 CDS
T09425
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132003900 (SUPT6H)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132003900 (SUPT6H)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
132003900 (SUPT6H)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
132003900 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
HHH_3
S1
Tex_N
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
132003900
NCBI-ProteinID:
XP_059235759
LinkDB
All DBs
Position
16:41848983..41882593
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVPKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcggaggaagagtacaatgatgaaggc
gaagtggtgccccgagtgcccaagaaatttgtggaagaggaggatgacgatgaggaggag
gaggaggagaacctagatgatcaggatgagcaaggcaatctgaaaggctttatcaatgat
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgatgaggatgatgacgaggaggaatatggcaaagaagaacat
gaaaaagaggcaattgcggaggaaatcttccaggatggggaaggggaagaagggcaggaa
gccgtggaggcccccatggctcctccagaggaggaggaggaagatgatgaagaatcagac
attgatgacttcattgtggatgatgatggacagcctctgaaaaaacctaagtggcggaaa
aagcttcccggatacacagatgcggccctgcaggaagcccaggagatttttggtgtggac
tttgactatgacgagtttgagaaatacaatgagtacgatgaagaactggaggaagagtat
gagtacgaggatgatgaggctgagggtgagatccgcgtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatctttgagatgtacgagcccagcgaactagaaagcagc
cacctcacagatcaggacaatgaaatccgggccacagacctgcctgagaggttccagctc
cgctccatcccagttaagggggctgaagatgatgaactagaagaagaagctgactggata
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaaggacccagcacaattcagaaaattaaa
gaagccctaggcttcatgcgaaatcaacactttgaggtgccttttattgctttctaccgt
aaagaatatgtggagcctgagttgcatatcaatgacctatggagggtgtggcagtgggat
gaaaagtggacccaactaaggatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttaccagtatgagcagatttccgctgaccctgacaaaccccttgctgatggcatc
cgggctctggataccaccgacatggagaggcttaaggatgtgcagtcaatggatgaactg
aaagatgtctacaaccatttcttgctttattatggccgtgatatccccaagatgcagaat
gccgccaaggccagccgcaagaagctgaagcgtgtacgggaagagggagatgaggaaggt
gagggtgaagaggcagaagatgaggagcagaggggcccagagctcaagcaggcctcccgc
cgagacatgtacaccatctgccagagtgctgggctagatggtctggccaaaaagttcggg
cttactcctgagcagttcggggaaaacctccgggacagctaccagcggcatgagacagag
cagttccctgcagagcctttggagttggccaaggattacgtttgcagccagttccctacg
ccagaagctgtgctagaaggtgcccgctacatggtagccctgcagattgcccgagagccc
ctcgtccgacaggtgctgaggcagaccttccaggagagagccaaactcaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccactacgcttattccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatatgcttggctgaa
gacgaggggctgctcaccattgacatcagcatagacatgaagggggtagaaggctacggc
aatgaccagacatatttcgaagagatcaaacagttttactaccgagatgagttcagccac
caggtgcaggagtggaaccggcagcgtaccatggccatcgaacgggctttgcagcagttc
ctctatgtacagatggccaaagagctcaagaacaagttgctggcagaagccaaagaatat
gtcataaaggcctgtagtcggaaactctacaactggttgagggtcgcaccctaccggcca
gatcagcaggtagaggaagatgatgactttatggatgagaaccaagggaagggcatccgc
gttctaggcatcgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaac
ggcgaaggagaagtgacagacttccttcggctgccccattttaccaaacggcgaactgca
tggagagaggaggaacgggaaaagaaggctcaagatattgaaaccctaaagaaatttctt
ctgaacaaaaagcctcatgtggtaacagtcgcaggagaaaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtgcatgaactggaccagggccaacagctgtcctctatt
ggggtggagctggttgataatgagttggccattctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctccagtgctgagacaggctgtctccctggcccggcgcatc
caggaccctctgattgaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctc
aagtttcatcccttgcaggagcacgtggtgaaagaggagctgctcaacgccttgtactgt
gaatttatcaaccgagtcaatgaggttggggtcgatgtcaaccgtgccattgcccaccca
tacagccaggccttaatccaatatgtctgtggcctgggacctcgaaaagggacacatctc
ctcaagatcctgaagcaaaacaacaccaggcttgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacacagcc
tccctgggggacagcactgactcatacattgaagttcttgatggttcccgagtccaccct
gagacctatgagtgggccaggaagatggcagtggacgctctggaatatgatgaatcagct
gaggacgccaaccctgcaggagccctcgaagagatattggaaaacccagagcgactcaag
gacctggacctagatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcaccttatatgacatccgggcggagctgagctgccggtataaggacctccggacagcc
tatcgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagcttatcatctgcaatgtcaccggcattgcccacaggcgtccccag
ggtgagagctatgaccaggcaatccgcaacgatgagacagggctctggcagtgtcccttc
tgtcagcaagacaatttccccgaactcagtgaggtctggaaccactttgacagcggttcg
tgccctggccaggccattggtgtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccagaggagcgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacattgagaagttcagcgccgaccttacc
tgccgaacctcagacctcatggacaggaacaatgagtggaaactgcccaaagacacctac
tatgactttgacgccgaagcagcagaccacaagcaggaggaggatatgaaacggaagcag
cagcggaccacatacatcaagcgagtgatcgcacacccatctttccataatataaacttc
aagcaagcagaaaagatgatggagaccatggaccagggtgatgtgatcatccgcccgagt
agcaagggtgaaaatcacctgaccgtgacctggaaggtcagcgacggcatctaccaacac
gtggatgtccgggaagaaggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aatagtgaggaatttgaagacttggatgagattgttgctcgctatgtccagcccatggca
tcctttgcccgtgacctcctgaaccacaagtattatcaggactgcagtggtggtgaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactcctgaaggattccggtaccggggccaaatc
ttccctactgtgaatggacttttcagatggtttaaggatcactaccaggatcctgtaccg
ggcatcacccccagtagcagcagcaggacccggacacctgcttctatcaatgccacccca
gccaacatcaaccttgcagatctgacgcgagctgtgaatgccttgccccagaacatgacc
tcccagatgttcagtgccattgcagccgtgacaggccaaggacagaaccctaatgccacc
ccagcccagtgggcctccagccagtatggctatggcggcagtggagggggcagtagcgct
taccatgtattcccaacgccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaacccccagccagcccatcaccacaccacagtaccaccagctccaggcc
agcaccaccccacagtctgcccaggcccagccccagccttcttccagctctcggcaacgg
cagcagcagccaaagtccaacagccatgccgccatcgactgggggaagatggcagagcag
tggctacaggagaaggaagccgagaggcggaaacagaagcagcggctgacacctcgaccc
tctcccagccccatgatcgaaagcacccccatgtccattgccggcgatgccaccccgctc
ctggatgagatggatcggtag
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integrated database retrieval system
