Methanobrevibacter olleyae: YLM1_1722
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Entry
YLM1_1722 CDS
T04385
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mol
Methanobrevibacter olleyae
Pathway
mol03410
Base excision repair
mol03430
Mismatch repair
mol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YLM1_1722
03430 Mismatch repair
YLM1_1722
03440 Homologous recombination
YLM1_1722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mol03400
]
YLM1_1722
DNA repair and recombination proteins [BR:
mol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
YLM1_1722
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YLM1_1722
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
YLM1_1722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
TadZ-like_ARD
Motif
Other DBs
NCBI-ProteinID:
AMK16277
UniProt:
A0A126R2H8
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All DBs
Position
2062696..2064111
Genome browser
AA seq
471 aa
AA seq
DB search
MANYQKDGDTIQQKQHSLSNRDSEKHHALLNRASEACDMLKKHIENDNIIRLISHNDADG
ISAAGVIANAIKEEGGQFHITIVPRLKPDVIRDVAKEKYELYVFSDMGSACIKQLNSLKS
DVIVADHHQPSTHKPKDNLVHVNPHLFGVDGSREISGAGSSYLVVRDMGKKHLAYMALIG
AFGDMQCQNRFTGVNQLILKDGQEAGNLEIHEDLKIVSKTQEPLFKSIAYTLNPPLPGLT
GSLENSQGLLEKMGVSYGINFIELEDEEKDVVKDELVKINPQIFGDVYSVPREHPVLRNL
EEYSAILDACGKNKEYGLALSIILGEREEPLDKALKFQKSYRDNLTKGFDWINREGAQQM
NYIQYIYSEDKVLKSIIGTIAGVGMSAKILDDNKPILGLSRLHKDIKVSGRATRPMVTCG
VNLGKALADASVNFGGQGGGHDIAAGAIIPYEAKNQFLHLVDQIIESQLNS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggccaattaccagaaggatggagatacgatccaacaaaagcagcactccttgtcaaat
agagatagtgaaaaacatcacgctcttttaaatagggctagtgaagcttgtgatatgctt
aaaaagcatattgaaaatgataacattattagattaatttctcataatgatgctgacgga
atatccgcagctggtgttatagctaatgctataaaagaagaagggggacaattccatata
actattgttcctcgtttaaaaccagatgtaattagggatgttgcaaaggaaaaatatgaa
ttatacgttttttcagatatgggcagtgcttgtattaaacaacttaattccctaaaatct
gatgttattgttgcagaccaccatcagccaagtactcataaacctaaagataatcttgtt
catgtaaaccctcatttatttggtgttgacggaagtcgtgaaataagtggtgcaggttct
agctatttggttgttagagatatgggtaagaaacatttagcatatatggcacttatcggt
gcttttggtgatatgcaatgtcagaatagatttactggtgtaaaccaattaatattaaaa
gatggtcaagaagcaggtaatttagaaatccatgaagatttaaagatagtctctaaaaca
caagaacctttatttaaatcaattgcttatactttaaaccccccacttccaggtttaact
ggtagcttggagaactcccaaggactccttgaaaaaatgggtgtttcttatggtattaat
ttcattgaattagaagatgaggaaaaggatgttgttaaagatgaacttgtaaaaataaat
cctcaaatatttggggatgtttatagtgttcctcgtgagcatcctgttttacgtaattta
gaagagtattctgcaatcttagatgcttgtggtaaaaacaaggaatatggattagcactt
agcattattcttggtgagcgagaagagcctttagataaagctctcaaatttcaaaaatct
tatagggataatctcactaaagggtttgattggattaaccgtgaaggtgcccaacaaatg
aattatattcaatatatttacagtgaagataaagtccttaaaagtatcattggaacaatt
gctggtgtaggaatgtctgctaaaatattagatgataataagcctattttaggcctatct
agacttcataaagatattaaagtttctggtagagctacacgaccaatggttacatgtgga
gttaatttaggtaaagctttagctgatgcttcagttaacttcggtggacaaggtggtgga
catgacatagcagcaggcgctattataccatatgaagctaagaatcaattcttacattta
gttgatcagattatcgagtctcaattaaatagttaa
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