Candidatus Methylomirabilis oxygeniifera: DAMO_0812
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Entry
DAMO_0812 CDS
T02155
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox03420
Nucleotide excision repair
mox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DAMO_0812 (uvrD)
03430 Mismatch repair
DAMO_0812 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mox03400
]
DAMO_0812 (uvrD)
Enzymes [BR:
mox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAMO_0812 (uvrD)
DNA repair and recombination proteins [BR:
mox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DAMO_0812 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
DAMO_0812 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DUF3553
Motif
Other DBs
NCBI-ProteinID:
CBE67875
UniProt:
D5MLK9
LinkDB
All DBs
Position
complement(685432..687621)
Genome browser
AA seq
729 aa
AA seq
DB search
MRSDAITADLNPRQAEAVLHTQGPLLVLAGAGSGKTRVITRRIAYLIGHCGVAPWNILAV
TFTNKAAGEMKRRVADLVGQHASEPGLRDGSGVWVGTFHSTCVRILRKHGAALGIKSSFV
IYDEGDQMSLMRDCLRAQGLSERSLNPRAILSRISRAKNELLSAEEYALQANDRMEERTS
KLYLMYQERLDGLQALDFDDLLMLTVRLFEQHPEALAAYQDLWRYILVDEYQDTNHAQYR
LIHLLASQYGNLCVVGDDDQSIYRWRGADLNNILDFERDHASCAVIRLEQNYRSTQQILQ
GAGGVVAHNYGRKGKTLWTENEAGDPIVLYRALDENDEALFVARTIQGRVADEGTGYDAY
AIFYRTNAQSRVLEEALRNALIPYAIVGGLRFYERKEIKDLLAYLRWVVNPADSVSFKRL
VNAPARGIGPATIAKLELLAMQEKVTIWEACQRAAHKKLFNTKQQAAMEGLLRLMEEARA
QSVLTPISDLIAELITQSGYAEELEHERTPEAESRLENLKELVTAAQEFAERNADGGLPA
FLDSVALISDLDGYAEGRGAVTLMTLHTAKGLEFDTVFMVGLEEGIFPHALAMPDERELE
EERRLCYVGMTRARQRLYLASARQRRLYGNRSFNLPSRFLDEIPAEVLQVRDPWESRSMS
PSPSTFPERHNDEPFVDRLYPGARIRHPDFGVGVIRERSGSGDDLKVVVRFNGAGEKKLM
VKYAQLEQA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtgagatctgacgctataactgccgatctgaacccgcgacaggcggaggcggtcctgcac
actcaagggccgcttctggtgctggcgggcgccgggtcgggaaagacccgggtgatcacc
agacggatcgcctatctgatcggtcactgcggggtcgcaccctggaacatcctggcggtc
acgtttaccaataaagcagccggtgaaatgaaacggcgagtcgcggatctggtgggacaa
cacgcctctgagcccggtctcagggacggcagcggcgtctgggtcgggacgtttcattct
acctgtgttcgaattctacggaagcatggcgcggcgctgggcatcaagagttccttcgtc
atttacgatgagggcgatcagatgagcctcatgcgggactgcttgcgagcgcagggtctg
tccgaacgctccctgaaccctcgcgcaatcctttcccgcatcagccgcgcgaagaacgag
ctgctctccgccgaggagtatgcgctgcaggccaatgaccggatggaggaacggacctcc
aagctgtacctcatgtatcaggagcggctggatggccttcaggcgctcgactttgacgat
ctactcatgttgacggtgcgtctcttcgagcaacatcccgaggcgctggcagcgtaccag
gatctttggcgctatatcctggtggacgaataccaggatacgaaccacgcccagtaccgc
ctgatccatctgctggcgagccaatacggaaatctctgcgtggtgggcgacgacgaccag
tcgatctatcgatggcgcggcgccgacctgaacaatatcctggacttcgaacgggaccat
gccagctgcgcggtaatccgactggaacagaactatcgatcgactcagcagatcctccag
ggcgccggcggggtggtggctcacaactacggtcggaaggggaaaacgttatggaccgag
aacgaggccggagatccgatcgtactctaccgagcgctcgacgaaaacgatgaggcgctc
tttgtcgcccggacgatccaaggtcgggtagccgatgaggggacggggtatgacgcctat
gcaatcttctatcggacgaatgcgcagtccagggtcctggaggaggcgctgcggaatgcc
ttgatcccgtatgccattgtgggcggactccgcttctatgagcggaaggagatcaaggat
ctcctggcctatttgcgctgggtggtcaatcccgccgacagcgtcagcttcaagcgcctt
gtgaatgcgccggcgcgcgggatcggaccggccacgatcgctaagctcgaactgttggcc
atgcaagagaaggtaacaatctgggaggcgtgccaacgcgctgcgcacaagaagctgttc
aataccaagcaacaggcggccatggagggattgctgcgcctcatggaggaggcacgagca
caatcggtcctcaccccgatttctgatctgatcgcagagttgatcacccagtccgggtat
gctgaggagttggaacacgagcgaacgccggaggccgagagccgcctggaaaacctgaag
gaacttgtgactgctgcccaggaatttgcggaacgcaatgccgacggggggttgccggcg
ttccttgactccgtcgcgctgatcagtgacctcgacggatacgccgaaggccggggcgcg
gtgacgctcatgacgctgcacacagccaagggcctggagtttgacaccgtcttcatggtc
ggactggaggaagggatcttccctcacgcccttgccatgcccgacgagcgggagttggag
gaggagcgcaggctctgttatgtcggcatgaccagggccaggcaacggctctatcttgcg
tcggcgaggcagcgtcgcctgtacggcaatcggagtttcaatctgccgtcacggttcctg
gatgaaattccggccgaagtcctgcaggtccgcgatccgtgggaatcccgatccatgagc
ccatcaccctctacctttcctgaacgccacaatgatgagccgttcgtcgatcgcctctat
ccaggcgctcgcatccggcatcccgacttcggcgtcggggtcattcgggaacggagcggc
agcggagacgatctgaaggtggtcgtacggttcaacggcgccggtgaaaagaagctcatg
gtcaagtatgcccagttggagcaggcctag
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integrated database retrieval system
