Candidatus Methylomirabilis oxygeniifera: DAMO_2423
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Entry
DAMO_2423 CDS
T02155
Name
(GenBank) putative Primosomal protein N' (ATP-dependent helicase priA) (Replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAMO_2423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mox03400
]
DAMO_2423
Enzymes [BR:
mox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAMO_2423
DNA repair and recombination proteins [BR:
mox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAMO_2423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_16
AAA_19
RecA
AAA_22
ATPase_2
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
CBE69477
UniProt:
D5MIX4
LinkDB
All DBs
Position
2082837..2085437
Genome browser
AA seq
866 aa
AA seq
DB search
MATKADHLLADIVLPVPPRRVLTYTIPPSMQQQADVGKRALVPLGPRLVTGYIVGLDTFS
DQRSATSRQTSELKPIDAILDIEPLLDHHMLDLTRLVADYYMTSWGSVIRTALPPGIDRS
TVRTVQLVEPQDMAPHAVSGEQLAQEIGWFDPSQQQILTTLHAQRRMSLASLKRQWPNEQ
VDRLIRLLVRHNLARIEYQERLPSVRPVFRPLLSLAVDRAAAEIELAALRRRAPRQASLL
DRLLQSGVALTSAEAAIIAGASGIRSLIAKGVIRRTTEEIERSPWDETTIVTSAWPEPNS
AQHTAIHGLLEGLSSGAFLPALLYGATGSGKTEVYLRVIGEVVRQGGQALILVPEIALTP
VTADRFRSRFGNRVALLHSALSPGERLDQWRRIKRGLADIVVGTRSAVFAPLSRLRLIVV
DEEHDASYKQQDEPHYHARDVALTRGEMLGITVLLGSATPSYESIHRAKEGAYRLFRLPE
RVEDRALPRMTLIDMREERLARHVSGRNARREAQNPPTPPSQKGGAGGFGGRQAEKGPLI
FSRRLADAIKEVLTKGEQVLLFINRRGYARLLLCRECGFTLRCPHCSVSLIYHAVDSRMR
CHYCDYRERPPEHCPQCGGIACGWLGYGTQQVEAAARLLVPNASIVRMDRDTTRQRRAHQ
QILAGVQQRRTQILIGTQMVGKGHDFPGITLVGILSADASMQIPDFRAGERTYALLTQVA
GRAGRGNRPGHVIVQTYNPEHYCILAARNHDYEALYALERPLREERGLPPFGFLVLLLIT
SSHEGQAQEKAEQLAGLLLERAVSPLTVEGPASAPVYRLKGRYRWQILAKGPDPSALHNW
VKETIALLPPSGQAGIDIDVDPVDLC
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaagccgatcatcttctcgccgacatcgtcctgccggttccaccacgaaga
gtcctgacgtatactatcccgccctccatgcagcaacaggcggatgtcggcaagcgagca
ctcgtcccgctcggccctcgcctggtgaccggatatattgtcggcctcgacacgttcagt
gaccagcgttcagcaaccagccgtcagacttcagagctcaagccgatcgacgcaatcctg
gacatcgagccgcttctggatcaccacatgctggatttgacgcgcctggtcgcggactac
tatatgacgtcgtgggggtcggtgattcgaacagccctgccgcccgggatcgatcgcagt
acggtccgtactgttcagcttgtcgagccgcaggacatggctccgcatgctgtaagcgga
gaacagctcgcccaggagattggatggttcgacccctctcagcagcagatactgactaca
ctgcacgcacaacgccggatgtcgctggcatcgctcaaacggcaatggccgaacgaacag
gttgaccggcttatccggttgcttgtcaggcacaacctggcaaggatagaatatcaggaa
cgtctaccctcagttcggcccgtcttccgacccttgctcagcctggcggtcgaccgggcc
gcagcggagatcgagttggccgcgctccgacgccgggcaccgcgacaggcctcgctactt
gatcggctgttgcaatccggtgtagcgctcacgtccgcagaggctgccatcattgccggc
gcctccgggatccgcagtcttatcgcgaaaggcgtcatccgccgcaccacggaggagatc
gagcgatcgccatgggacgagacgactattgtcacaagcgcctggccggaacccaactca
gcccagcacacggcaattcacggactcctggagggactctcgtcaggtgcatttctcccg
gcgctgctctatggcgcaacggggagcggaaaaaccgaggtctatctccgggtcatcggc
gaggtggtacgacagggagggcaggcgctgatactcgttccggaaatcgccctaactcct
gtcactgccgatcgattccgctcccgcttcggcaatcgggttgcgttgttgcacagcgct
ctctcacccggcgagcggctggatcaatggcgtcgcatcaagcgcggactggccgacatt
gtcgtaggcacgcggtcggcggtcttcgctcccctctcccgccttcgcctcatcgtagtc
gatgaagagcacgacgcatcctacaagcagcaggatgagccgcactatcacgcaagagac
gtagcattgaccagaggagagatgttgggaattaccgtcctcctcggctccgccacccca
agctatgaaagcattcatcgcgcaaaggaaggggcttatcgactgtttcgacttcctgag
cgggtggaggacagggcgctgcctcggatgacactgatcgatatgcgcgaagaacgcctg
gcccggcatgtttcaggccggaatgcgcggcgcgaggcgcaaaatccccccaccccccct
tcacaaaaggggggcgcggggggatttggaggacgacaggcggagaaggggccgcttatt
ttctccaggcggctggcggacgcgatcaaggaggtactgacaaaaggggagcaggtcctg
ctgttcatcaatcgccgaggctacgccaggttgttactctgccgcgagtgtggttttacc
ttgcggtgtccgcattgcagtgtctcgcttatctaccatgcggtggatagcaggatgcgc
tgccactactgcgattatcgagaacggccgccggaacattgtcctcagtgcggtgggatt
gcgtgtggatggctcggatacggaacacagcaggtcgaagccgctgctcgactcctcgtc
ccgaatgcatccatcgtcaggatggatcgcgacaccaccaggcaacggcgcgcacaccag
cagattctcgcgggcgtccagcagaggcgcacgcaaattcttatcgggacgcagatggtc
gggaaaggacatgactttcccggcatcacgttagtcggcatcctctccgcggacgcctcc
atgcagatcccggatttcagagccggagagcggacctatgcgctgctcacacaggtggcc
gggcgggccggccgcgggaaccgccccggccacgtcattgtccagacctataatccggag
cactattgcatcctcgcggcccgcaatcacgattatgaagcgctgtacgcgctcgagcgg
ccgctcagagaggagcgcggtcttcctcccttcggctttcttgtcctgctcctgatcacg
tcttcacatgaggggcaggcacaagaaaaggctgagcaactcgccggtctgctcctggag
cgggccgtttcgccccttactgtcgaggggccggcgtcggcgccggtgtatcgattaaaa
ggacgctatcgctggcagatcctcgccaaaggtcctgacccgagtgcgctgcataactgg
gtcaaagagacgattgccctgcttccgccgtcaggacaggccggcatcgacattgatgtc
gatccggtcgatctgtgttga
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