Microbulbifer pacificus: R5R33_16740
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Entry
R5R33_16740 CDS
T09537
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf00071
Fatty acid degradation
mpaf00280
Valine, leucine and isoleucine degradation
mpaf00310
Lysine degradation
mpaf00362
Benzoate degradation
mpaf00380
Tryptophan metabolism
mpaf00410
beta-Alanine metabolism
mpaf00640
Propanoate metabolism
mpaf00650
Butanoate metabolism
mpaf00907
Pinene, camphor and geraniol degradation
mpaf00930
Caprolactam degradation
mpaf01100
Metabolic pathways
mpaf01110
Biosynthesis of secondary metabolites
mpaf01120
Microbial metabolism in diverse environments
mpaf01200
Carbon metabolism
mpaf01212
Fatty acid metabolism
Module
mpaf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
R5R33_16740 (fadB)
00650 Butanoate metabolism
R5R33_16740 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
R5R33_16740 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
R5R33_16740 (fadB)
00310 Lysine degradation
R5R33_16740 (fadB)
00380 Tryptophan metabolism
R5R33_16740 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
R5R33_16740 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
R5R33_16740 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
R5R33_16740 (fadB)
00930 Caprolactam degradation
R5R33_16740 (fadB)
Enzymes [BR:
mpaf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
R5R33_16740 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
R5R33_16740 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
R5R33_16740 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
R5R33_16740 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WOX05370
LinkDB
All DBs
Position
3951610..3953766
Genome browser
AA seq
718 aa
AA seq
DB search
MLFSGKALSVQMLENGIAELKFDLEGESVNKFNRLTVAEFSGALDAIEKAGDIKGLLLTS
GKSVFIVGADITEFGGAFSAGAEGIADLMNKNNENINRLEDLPFPTAVAINGYALGGGFE
VCLGCDFRVMGEQAKVGLPEVKLGLIPGWGGTVRLPRVVGVDVAAEWIAAGKEQRPDAAL
TAHAVDAVVPTEKLKDAALKLLGRAISGELDYTARREVKKSPIPLNDTEALMAFFTTKAF
VGQQAGRNYPSPVNAVTSIEQGYKLGRDEALKIEQQQFIASAQTETAKSLVGLFLRDQMI
GKVAKSWEKKADKKIERAAVLGAGIMGGGIAYQSAYKGTAIKMKDINQAGIDLGLKEASK
LLSNMVERGRMGAREMGEVLNRIEPTLSYDGFDNVDVVVEAVVENPKVKHAVLKEVESKV
SEDTVIASNTSTISIDTLAEPLSRPENFLGMHFFNPVHKMPLVEVIRGEKTSEKAVARVV
AYANKMGKKAIVVRDCPGFLVNRVLFPYFAGFAMLVRDGADFQQVDKVMERWGWPMGPAY
LMDVVGIDTGVHAEKVMAEGFPERMGKTFTAASDVMYEAGRYGQKNGKGFYVYEEDKKGR
PKKVASEETYELLKPHVADRREFENDEIVARMMVPMATELARCLEEGIVDSPAEADMALI
YGIGFPPFRGGIFAWLDSIGLDNFVKMADQYSDLGELYKPTEGMREMAANGKTYYGDK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttatttagtggcaaagcgctatccgtgcaaatgctggaaaacggcatcgcggaactg
aaattcgatctggaaggcgagtccgtcaacaagttcaatcgtcttaccgtggcggaattt
tccggcgcactggatgcgattgaaaaggctggcgacatcaaaggcctgctgctgaccagc
ggcaaaagtgtatttatcgtcggtgccgatattaccgagtttggcggtgcgttttccgcc
ggcgcggaaggcatcgccgacctgatgaacaagaacaacgaaaacatcaatcgcctggaa
gatctgccgttcccgaccgcggtagcgatcaatggttatgcattgggtggcggcttcgaa
gtctgtctgggttgtgatttccgggtgatgggcgagcaggcgaaagtcggcctgccggaa
gtgaagctgggtctgattccgggctggggtggtaccgttcgtctgcctcgcgtggtaggt
gtggacgtcgccgccgagtggattgccgccggtaaagagcagcgcccggatgcggcgctc
accgctcatgccgttgatgcagttgtgccgacggaaaaactgaaagacgcagcgctgaag
ctgctcggtcgcgccatctctggcgaactggattacaccgcccgtcgcgaagtcaaaaaa
tccccgatcccgctgaacgacaccgaagcgctgatggctttcttcaccaccaaggcgttt
gtgggccagcaggcgggtcgcaactatccctccccggtcaacgctgtgacctccatcgag
cagggctacaagctgggccgtgatgaagcgctcaagattgagcagcaacagttcatcgcc
agcgctcagaccgaaaccgccaaatcgctggtgggcctgttcctgagggatcagatgatc
ggcaaggtcgcgaagagttgggaaaagaaagccgacaagaaaatcgagcgtgctgctgta
ctgggtgcgggcatcatgggtggcggtatcgcctaccagtccgcctacaagggcaccgcg
atcaagatgaaggacatcaaccaggccggtatcgacctcggtctgaaagaagccagcaag
ctgctgtccaatatggttgagcgcggtcgcatgggcgcgcgtgaaatgggtgaggtgctc
aatcgtatcgagccaaccctgagctacgacggtttcgacaatgtggacgttgtggttgaa
gccgtggtggaaaacccgaaggtaaaacacgcggtcctgaaagaggtggaaagcaaagtc
tctgaagataccgtgatcgcctccaacacgtcgacgatttccatcgacaccctggcggaa
cctctttcccgtccggaaaatttcctcggcatgcacttcttcaacccggtgcacaaaatg
ccgctggtggaagttatccgcggtgaaaagacgtcagaaaaggcggttgctcgtgtcgtg
gcctatgccaacaaaatgggcaaaaaggcgatcgttgtgcgcgattgccccggattcctg
gtgaaccgcgtactgttcccgtacttcgccggcttcgccatgctggtgcgcgatggcgcc
gacttccagcaggtcgacaaggtcatggagcgctggggctggccgatgggtccggcttac
ctgatggatgtggtcggtatcgacaccggtgtgcatgcggaaaaagtgatggcggaaggc
ttccccgagcgtatgggtaaaacctttaccgctgcttctgatgtcatgtatgaagctggt
cgctatggccagaaaaacggcaagggcttctacgtttacgaagaagacaaaaaaggtcgc
ccgaaaaaagtggcctcggaagaaacctacgagctgcttaagccgcacgtcgcggatcgc
cgtgaatttgaaaacgatgagatcgttgcgcgcatgatggtgccgatggcgaccgagctg
gctcgctgtctggaagaggggatcgtcgattcgccggcagaggcagatatggcgctgatc
tacggtattggcttcccgcccttccgcggcggtatttttgcctggctggacagcatcggc
ctggataacttcgtgaagatggctgatcaatacagtgatctgggcgagctgtacaagccc
accgaaggtatgcgcgaaatggctgccaatggcaaaacctactacggcgacaagtaa
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