KEGG   Mus pahari (shrew mouse): 110312901
Entry
110312901         CDS       T05929                                 
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03030  DNA replication
mpah03410  Base excision repair
mpah03420  Nucleotide excision repair
mpah03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110312901 (Rfc5)
   03410 Base excision repair
    110312901 (Rfc5)
   03420 Nucleotide excision repair
    110312901 (Rfc5)
   03430 Mismatch repair
    110312901 (Rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpah03032]
    110312901 (Rfc5)
   03036 Chromosome and associated proteins [BR:mpah03036]
    110312901 (Rfc5)
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110312901 (Rfc5)
DNA replication proteins [BR:mpah03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110312901 (Rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    110312901 (Rfc5)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110312901 (Rfc5)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110312901 (Rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    110312901 (Rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N DEAD DUF815 AAA_14 ResIII DNA_pol3_delta AAA_5 AAA_19 ATPase_2 TIP49 AAA_30 PhoH TniB AAA_7 nSTAND3 T2SSE bpMoxR Thioredoxin_6 Mg_chelatase AAA_25 AAA_3 AAA_18
Other DBs
NCBI-GeneID: 110312901
NCBI-ProteinID: XP_021042507
Ensembl: MGP_PahariEiJ_G0024225
LinkDB
Position
23:complement(7196051..7205716)
AA seq 339 aa
MAAAAPSQQRPAAARARNLPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLEHVVQEENVDISEDGMKALVTLSTGDMRRALNILQSTNMAFGKVTEETVYTCTGH
PLKTDIANILDWMLNQDFTTAYKNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHL
LTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVAEA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcggcggcggcgccttcgcagcagcggccggcggcggcccgggcccggaacctgccc
tgggtcgagaagtaccggccacagaccttggccgatctcatttctcaccaggacattctg
agtaccattcagaagttcatcagtgaagaccgcctgccacacctacttctctatggccct
ccagggacaggaaagacatccaccatcctggcctgtgccaagcaactgtacaaagataaa
gaattcggctccatggtcttggagctgaatgcttctgacgaccgagggatcgatatcgtt
cgggggccaatcctcagctttgctagcacaaggacaattttcaagaaagggtttaagctt
gtgatcctggacgaagccgacgccatgactcaagatgcccagaacgccttgagacgagtg
attgagaagttcacagaaaacaccaggttttgcctcatctgtaactacctgtccaagatc
atccctgccttgcagtcacggtgcacgaggttccgatttggccctctgacacccgagctc
atggttcctcgactggagcatgtggtacaagaagagaatgtggatataagtgaagatgga
atgaaggccctggtcactctgtccactggggacatgcgaagggctctgaacatcctgcag
agtaccaatatggcctttgggaaggtgacagaggagactgtctacacttgcaccggacac
ccactcaagacagacattgccaacatactggactggatgctcaatcaggacttcaccacc
gcctacaaaaatatcatggagctgaagactctgaagggcttggcgctgcatgacatcctg
accgaggttcacttgtttgtgcacagagttgactttccatcttcagttcggatacactta
ttgaccaagatggcagacattgagtacagactttccgttggcaccaatgagaagatacag
ctgagctccctcatcgccgcttttcaagtcaccagagacctgatagttgcagaggcctag

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