Mus pahari (shrew mouse): 110313461
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Entry
110313461 CDS
T05929
Symbol
Abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1 isoform X1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah02010
ABC transporters
mpah04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110313461 (Abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110313461 (Abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110313461 (Abcd1)
Enzymes [BR:
mpah01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
110313461 (Abcd1)
Transporters [BR:
mpah02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
110313461 (Abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
Rad17
AAA_23
SMC_N
Adeno_IVa2
Motif
Other DBs
NCBI-GeneID:
110313461
NCBI-ProteinID:
XP_021043376
Ensembl:
MGP_PahariEiJ_G0031700
LinkDB
All DBs
Position
X:62325594..62346219
Genome browser
AA seq
736 aa
AA seq
DB search
MPVLSTPRPSRVTTLKRTAVVLALTAYGVHKIYPLVRQCLTPARGPQVPAGEPTQEASGT
TAAKAGMNRVFLQRLLMLLRLLFPRILCREAGLLALHSTALVSRTFLSVYVARLDGRLAR
CIVRKDPRAFSWQLLQWLLIALPATFINSAIRYLEGQLALSFRSRLVAHAYGLYFSQQTY
YRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGT
AWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGKLRYMHSRVVANSEEIAFYGGHE
VELALLQHSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYAES
DSEAMKKAALEMKEEELVSERTEAFTIARNLLTAAADATERIMSSYKEVTELAGYTARVY
EMFQVFEDVKHCRFKRTGDLEEAQAGPGVMVQSGVHVERPLKIQGQVVDVEQGIICENIP
IITPTGEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYSGVLYKPPPQRMF
YIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQQLEAILGIVHLRHILQREGGWEAVCD
WKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHR
PSLWKYHTHLLQFDGEGGWKFEKLDSAARLSLTEEKQRLEQQLAGIPKMQGRLQELRQIL
GEAAAPVQPLVPGIPT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctctccactccccggccctcacgggtgaccacgctgaagcgcacagctgtg
gtcctggccctcacagcctatggagtccacaaaatctaccctctagtacggcagtgtctg
actcctgccagaggtcctcaggtgccagctggggagcccacgcaagaggcctctggaacc
accgcagccaaggctggcatgaaccgggtattcctgcagcggctcctgatgctcctgagg
ctgctgttcccccgaatcttgtgccgggaagcagggctgctggccctgcattctactgcc
ctggtaagccgaactttcctgtctgtgtatgttgcccgcctggacggcagactggcccgc
tgcattgtacgtaaggaccctcgggcctttagctggcaactgctgcagtggctcctcatc
gcccttcctgccactttcatcaacagtgccatccgctacctagagggccagctggctctt
tctttccgaagccgtctagtagctcatgcctatggactctacttctcccaacagacttac
taccgagtaagcaacatggatggacgacttcgaaaccctgatcagtctctgacagaggat
gtggtagcctttgctgcctctgtagcccacctttattcgaacttgaccaagccactcctg
gatgtggctgtgacctcctacactcttcttcgagctgcccgatcccgaggagctggtaca
gcctggccctcagccatcgctggcctggtggtgttcctcacagccaacgtgcttcgagcc
ttctctcccaagtttggggagctagtggcagaggaggcacggcgaaaggggaaactgcgc
tacatgcactctcgagtggtggccaactcagaggaaattgccttctacgggggccatgag
gtggagctggcactactacagcactcctatcaagacctagcttcacagatcaacctcatc
ctgcttgaacgcctatggtatgtcatgctggaacaattcctcatgaaatatgtgtggagt
gcatctggcctgctcatggtagctgtccccatcatcacagccactggctatgcagagtca
gactcagaagccatgaagaaggcagccttggaaatgaaggaagaggagctggttagtgag
cgtacagaagctttcaccattgcccgaaacctcctcacagctgctgcagatgccaccgag
aggatcatgtcatcctataaggaggtgacagagctggctggctacacagccagggtgtac
gagatgttccaggtatttgaagatgtcaaacactgtcgttttaagaggacaggcgatcta
gaggaggctcaggctgggccgggggtcatggtacagtctggtgtccatgtagagaggccc
ctgaagatccaaggccaggttgtggatgtggagcaggggatcatctgtgagaacatccct
atcatcacacccactggagaggtggtggtggccagcctcaacatcagggtggaggaaggc
atgcacctgctcatcacaggccccaatggctgtggcaagagttctctgttccgaatccta
ggtggactctggcccacatacagtggtgtactctataagcccccaccccagcgcatgttc
tatatccctcagaggccctacatgtccgtgggctccttgcgtgaccaagtgatctatccc
gactctgcggaagacatgcggaggaagggctgctcggagcagcagctggaagcaatcctg
ggcatcgtgcatctccgccacatcctgcaacgggagggaggttgggaggcagtgtgtgac
tggaaggatgtcctgtctggaggtgagaagcagaggattggtatggcacgcatgttctac
cacaggcccaagtacgcccttctggatgagtgcactagtgctgtgagcattgatgtggaa
ggcaagatcttccaagcagccaaagatgctggtatcgcactgctctccatcacccatcga
ccctccctatggaagtaccacacacacttgctgcagtttgatggggaaggaggctggaag
tttgagaagctggattctgctgcccgcctgagcctgactgaagagaagcagcgcctggag
cagcaactggcaggcatccccaaaatgcaggggcgccttcaggagctccgccagatcctt
ggtgaagctgcagctccagttcaacccctggtcccaggcatccccacttga
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