KEGG   Mus pahari (shrew mouse): 110320094
Entry
110320094         CDS       T05929                                 
Symbol
Cd1d
Name
(RefSeq) antigen-presenting glycoprotein CD1d isoform X1
  KO
K06448  T-cell surface glycoprotein CD1
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04530  Tight junction
mpah04640  Hematopoietic cell lineage
mpah05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110320094 (Cd1d)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    110320094 (Cd1d)
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    110320094 (Cd1d)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:mpah04090]
    110320094 (Cd1d)
CD molecules [BR:mpah04090]
 Proteins
  110320094 (Cd1d)
SSDB
Motif
Pfam: MHC_I_3 C1-set MHC_I RabGGT_insert
Other DBs
NCBI-GeneID: 110320094
NCBI-ProteinID: XP_021051654
LinkDB
Position
4:77512252..77515461
AA seq 336 aa
MRYLPCLLLWAFLQVWGQSEVQQKNYTFRCLQMSSFANRSWSRTDSVVWLXDLQTHSWSN
DSDTISFTKPWSQGKLSNQQWETLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSX
GCEMYPGNASESFLHVALQGKYVXRFWGTSWQTVPGAPSWLDLPIKVLNADQGTNIMVQM
LLNDTWPQFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHLQLVCHVSGFYPKXVGVMW
MRGDQXQQGTHRGDILPNADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWGGR
QASVGLIVLIVLITLVVVGAAAYCIWRRRSSYQDIL
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcggtacctaccttgcctgttgctgtgggcattcctacaggtctggggacaatctgaa
gtccagcaaaagaattatacgttccgctgcctgcagatgtcttcttttgccaacagaagc
tggtcccgcacagacagtgtggtctggctggnggatctgcagacacacagttggagtaat
gactcagacactatcagcttcaccaagccatggtcccagggcaagttgagtaaccagcag
tgggagacgttgcagcatatgtttcaagtctatcgagtcagctttaccagggacatacag
gaattagtcaaaatgatgtcacctaaagaagactatcccattgagatccagttgtctnng
ggctgtgaaatgtaccctgggaatgcttcggaaagctttttacacgtagcacttcaagga
aaatatgtcntgagattctggggaacatcctggcagactgtcccaggagccccatcttgg
ttagacttgcccatcaaagtgctcaacgctgatcaagggacgaatataatggtgcagatg
ctcctgaatgacacctggccccaatttgtccgtggtctcctagaggcagggaagtcagac
ctagagaagcaagagaagccagtggcctggttgtccagtgtccccagctctgcacatggc
catctgcagctggtgtgtcatgtctcnggcttctacccaaagnctgtgggngtgatgtgg
atgcggggtgaccaggancaacagggtactcacagaggtgacatcctgcccaatgctgat
gagacctggtatcttcaagcaaccctggatgtggaggctggagaggaagctggcctggcc
tgcagggtgaagcacagcagcctaggagggcaggatatcatcctctactggggtggcaga
caagcatcagtgggcttgatcgtcttgatagtactaatcacactggtggtggtgggcgct
gcagcctactgtatctggagaaggagaagctcctatcaagacatcctgtga

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