Mus pahari (shrew mouse): 110321309
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Entry
110321309 CDS
T05929
Symbol
Psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 isoform X1
KO
K03032
26S proteasome regulatory subunit N2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03050
Proteasome
mpah05010
Alzheimer disease
mpah05012
Parkinson disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05017
Spinocerebellar ataxia
mpah05020
Prion disease
mpah05022
Pathways of neurodegeneration - multiple diseases
mpah05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110321309 (Psmd1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110321309 (Psmd1)
09164 Neurodegenerative disease
05010 Alzheimer disease
110321309 (Psmd1)
05012 Parkinson disease
110321309 (Psmd1)
05014 Amyotrophic lateral sclerosis
110321309 (Psmd1)
05016 Huntington disease
110321309 (Psmd1)
05017 Spinocerebellar ataxia
110321309 (Psmd1)
05020 Prion disease
110321309 (Psmd1)
05022 Pathways of neurodegeneration - multiple diseases
110321309 (Psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mpah03051
]
110321309 (Psmd1)
Proteasome [BR:
mpah03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
110321309 (Psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT
HEAT_EZ
PA26
Tim54
Motif
Other DBs
NCBI-GeneID:
110321309
NCBI-ProteinID:
XP_021053183
Ensembl:
MGP_PahariEiJ_G0027594
LinkDB
All DBs
Position
5:63487070..63559321
Genome browser
AA seq
953 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDPMETE
EKTASAPAGKTPDASPEPKEQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEVTCPKVNQFRQLYSKVINDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRY
QPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcagccgctggaattatttctcttctggatgaagaagagccacagcttaag
gaatttgcactacacaaattgaatgcagtcgtgaatgacttctgggcagaaatttctgag
tctgtagataaaatagaagttttatatgaagatgaaggtttccggagtcggcagtttgca
gccctggtggcctcgaaagtgttttatcacctgggggcttttgaggagtctctgaattat
gctcttggagcaggtgacctcttcaacgtcaatgataattctgaatatgtggagactatt
atagcaaaatgcattgatcattataccaaacagtgtgtggaaaatgcagatttgcctgaa
ggagaaaaaaagccaattgaccagagattggaaggcatcgtgaataaaatgttccagcga
tgtctcgatgatcacaagtataagcaagcgattggcattgctctggagaccaggagacta
gatgtctttgagaagactatactggaatctaatgatgtcccaggaatgctagcttacagc
ctcaaactctgcatgtctttaatgcagaataaacagtttcggaataaagttttgagagtc
ctggttaaaatctacatgaacttggaaaaacctgatttcatcaatgtttgtcagtgctta
attttcttagatgatcctcaggccgtgagtgatattttagagaaactggtaaaggaggac
aacctgctgatggcctatcagatttgttttgatttgtacgaaagtgctagccagcagttt
ttgtcatctgtaatccagaatcttcgaactgttggtaccccgattgcttctgtgcctgga
tctaccaatacgggtactgtgccaggatcagagaaagacagtgaccccatggagactgag
gagaagacagccagtgcaccggccgggaagacaccagacgcgagtccagagcccaaggag
cagacactgaaaatgattaagattttaagtggtgaaatggctattgaattacacctgcag
ttcctaatacgaaacaataacaccgacctcatgatcctgaaaaacacaaaggatgcagta
cgaaattctgtatgtcatacagcaactgtaatagcaaactcattcatgcactgtggtact
accagtgaccagtttcttagagataacttggaatggttggccagagccaccaactgggcc
aaatttactgcaactgccagcttgggtgtaattcataagggccatgagaaggaagcacta
cagttgatggcaacataccttcctaaggacacgtccccaggatcagcctatcaggaaggg
ggcggtctctatgcattgggtctcattcatgccaatcatggtggtgacataatcgactat
ctccttaatcagctcaagaatgccagtaatgatattgttagacatggaggcagcctgggc
cttggtttggctgcaatgggaactgcacgtcaagatgtgtatgatttgctgaaaacaaac
ctatatcaggatgatgctgtgacaggggaggcagctggcctagccttaggtttggttatg
ttaggttctaaaaatgcccaggcgattgaggatatggttggctatgcacaagagactcaa
cacgagaagattctgcgcggtctggcagttggcattgcattagtgatgtatgggaggatg
gaggaggccgatgctctcattgagtctctctgtcgtgataaggacccaattcttagaaga
tctggaatgtatactgtagccatggcttattgtggctctggtaacaacaaagccattcgg
cgcctgctacatgttgctgtaagtgatgtcaatgatgatgtcagaagagcagcagtggag
tcacttggcttcattttgttcaggacgcctgaacagtgtcccagtgtggtttctttgttg
tcagagagttataaccctcacgtgcgctatggagctgcaatggccctgggaatctgctgt
gctggtacaggaaacaaggaagcaattaatttactagagccgatgaccaacgaccctgtg
aactacgtgaggcaaggggctctgatagcctcagctctcatcatgatccagcagacagag
gtcacgtgtccaaaggtgaatcagttccggcagctgtattccaaagtcatcaatgacaaa
catgatgatgtcatggccaaatttggcgctattctggcccaaggcatactggatgcaggt
ggtcataatgtcacaatctccttacagtccaggactgggcacactcatatgccttctgtg
gttggcgtccttgtcttcacccagttctggttctggtttcccctttcacacttcctgtca
ttggcttatactcctacctgtgtcattggcctgaacaaggatttaaagatgccgaaagtt
caatataaatcaaattgtaaaccatccacatttgcatatcctgcccctctggaagtacca
aaagaaaaagaaaaggaaaaggtttccactgctgtgttgtctattactgccaaagctaaa
aaaaaagaaaaagaaaaagaaaaaaaggaggaagagaagatggaagtggatgaagcagag
aagaaggaagagaaagagaagaaaaaagaacctgaaccaaacttccagctgttggataat
ccagcacgagttatgcctgcccagctgaaggtcttaagtatgacagagacctgcagatac
cagccttttaaaccactctccatcgggggcatcataattctgaaagacaccagcgaagac
attgaagaacttgtggaacccgtggcagcacatggcccaaaaattgaagaggaagagcaa
gaaccagagcccccagagccattcgagtatatcgatgactag
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