Mycolicibacillus parakoreensis: MIU77_15365
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Entry
MIU77_15365 CDS
T07959
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mpak
Mycolicibacillus parakoreensis
Pathway
mpak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MIU77_15365 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpak03400
]
MIU77_15365 (recB)
Enzymes [BR:
mpak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MIU77_15365 (recB)
DNA repair and recombination proteins [BR:
mpak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MIU77_15365 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ULN52212
LinkDB
All DBs
Position
3213035..3216337
Genome browser
AA seq
1100 aa
AA seq
DB search
MSAAPFELSGALPAPGSTVVLEASAGTGKTFALAGLVTRYVADGHATLDQLLLITFGRVA
SRELRERVRGQMAAALAALEDRCAPANAFEHRLCAVDAATRAGRARRLRAALAGFDAATI
VTIHQFCSLVLRSLGVAGDTDASMTLVESLTDLVTEIVDDRYLARFGHDENPPALSRDEA
LKLATRVVEDPAAQLRPLDPEPGSAIAARLEFAREVLDELDRRKRRLGVLGYNDLLTRLA
DSLGQAGSGAAERMRRRWSIVMVDEFQDTDPVQWQVIDRAFRGHCTLVLIGDPKQAIYGF
RGGDIYTYLAAARAADDRRTLTTNYRSDAVLVDSLQVLLGGAQLGHPEIVAHPVAADRPG
HRLSGAPHNAPVRLRVVGRETVGRSGTQTVPISVLREHIPADLAADIGALLTSGARFADR
SVEAGDIAVIVGQHADARACRDALIAAGIPVVYTGDTDVFTSPAARDWLCLLEAFDQPHR
SGLVRAAACTAFFGETAETLSREGDRLTDRVADTLREWTDHARDAGIAAVLEAAQLAGMG
QRVLSRHGGERLMTDLVHVGQLLQEAAHRDRLELPGLRDWLRRQCQERSGATERNRRLDS
DAAAVQIMTVFVAKGLQFPVVYLPFAFNRHIVRDEILLYHDDTDGAETRCLHIGGRTAPD
RRSVDELHRTEAARDNIRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRGPGDAQI
PVACERNITDAEAWAVFTGWQEAGALTLEHSVVGAAVALPRSPTAGPLAVRHFDRTIDLG
WRRTSYSALLRHAEQAGAPGVHSEPEVAVRDDEPEISVAVTTAADATGVQIRSPMADLPR
GAAFGSLVHATLETTDPGATDLAAALREQIELHTQWWPVEVAPADLAEALLPMQDTPLGP
LADALTLRQIGLTDRLCELDFEIPLMGGDGAVSPELRLADLAVLLREHLPESDPFAGYAD
RLASEALGGQSLRGYLSGSIDVVLRLPDHRYLVVDYKTNYLGDSAADYGTAALIEAMLHS
DYPLQALLYAAVLHRFLRWRQPGYDPQRHLGGVLYLFVRGMCGPDTPLVDDQPTGVLSWR
PPAALVVALSELLQHGRGRP
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgccccgttcgagctctccggcgcgctgccggcgccgggatcgaccgtggtg
ttggaggccagcgccggaaccggcaaaacgttcgcgctggccgggctggtcacccgctac
gtcgccgacgggcacgccaccctcgatcagctgctgctgatcacgttcggccgggtggcc
agccgggagctgcgcgagcgggtgcgcggccagatggcggccgccctggcggccctcgag
gaccggtgcgccccggccaacgcgttcgaacaccggctctgcgccgtcgacgccgcgacg
cgcgccgggcgggcgcgccggcttcgcgcggcgctggccgggttcgacgcggccaccatc
gtcaccatccaccagttctgttcgctggtgctgcgatcgctgggggtcgccggggacacc
gacgcgtcgatgaccctggtggagagcctcaccgacctggtcaccgagatcgtcgacgac
cggtatctggcccggttcggccacgacgagaacccgccggcgctgagccgcgacgaggcg
ctcaagctggccacccgggtggtggaggacccggcggcgcagctgcgccccctcgacccc
gaacccgggtcggccatcgcggcacgcctggagttcgcccgggaggtgctcgacgaactg
gaccggcgcaagcgccgtctcggggtgctcggctacaacgacctgttgacccggctggct
gattcgttgggccaggccggatccggtgctgccgagcggatgcgccggcgctggtcgatc
gtgatggtcgacgagttccaggacaccgatccggtgcagtggcaggtcatcgaccgggcg
tttcgcggtcactgcacgctggtgctgatcggtgaccccaaacaggcgatctacgggttt
cgcggcggcgacatctacacctatctggcggccgcgcgcgccgccgacgaccggcgcacc
ctgaccaccaactaccgcagcgacgcggtgctggtggacagcctgcaggtgctgctcggc
ggcgcacaactgggccacccggagatcgtggcgcaccccgtcgcggcggaccggcccggc
caccggctcagcggggcgccgcacaacgcaccggtgcgactgcgggtcgtcggccgggag
acggtggggcgcagcggaacccagacggtaccgatttcggtgctgcgcgaacacattccc
gccgatctggccgccgacatcggggcgttgttgacctccggagcccggttcgccgaccgc
agcgtagaagccggcgacatcgcggtcatcgtcggccagcacgccgacgcccgcgcctgc
cgcgacgcgctcatcgccgccggcatcccggtggtctacaccggcgacaccgacgtgttc
acctcgccggccgcccgggactggctgtgcctgctggaggcgttcgatcaaccgcaccgc
agcgggctggtgcgcgccgcggcgtgcacggcgttcttcggcgagaccgccgagacgttg
tcacgcgagggcgaccggctcaccgaccgggtcgccgacacgctgcgggagtggaccgac
catgcccgcgacgccgggatcgccgcggtgctcgaggccgcccagctggccgggatgggt
cagcgggtgctcagccggcacggcggggaacggttgatgaccgacctggtgcacgtcggg
cagctgctgcaggaggccgcccaccgcgaccggctggagctgcccgggttgcgggactgg
ctgcgccggcagtgccaggaacgcagcggcgccaccgaacgcaaccgccggctcgacagc
gacgccgcggccgtgcagatcatgacggtgttcgtcgccaagggcctgcagttcccggtc
gtgtacctgccgttcgcgttcaaccgccacatcgtccgcgacgagatcctgctctaccac
gacgacaccgacggtgccgagacccgctgtctgcacatcggtgggcgcaccgccccggat
cggcgcagcgtcgacgagctgcacaggacggaggccgcccgcgacaacatccggctgacc
tatgtcgcgttgacccgggcgcagagccaggtggtggcgtggtgggcgccgaccttcgat
gaggtcaacggcgggttgtcgcggcttttgcgcggccgcgggcccggcgacgcgcagatc
ccggtggcctgtgagcgcaacatcaccgacgccgaggcgtgggcggtgttcaccggctgg
caggaagccggggcgctgaccctggagcactcggtggtcggcgcggcggtggcgttgccg
cggtcgccgaccgccggcccgttggcggtgcgtcacttcgaccgcaccatcgacctcggc
tggcgacgcacctcgtattcggcgttgctgcgccacgccgagcaggccggcgcccccggg
gtgcattcggagccggaggtcgcggtgcgcgacgacgaacccgagatctcggtcgcggtc
accaccgccgccgacgcgaccggcgtccaaatccgctcgccgatggccgatctgccgcgg
ggcgcggcgttcgggtcgctggtgcacgccacgctggagaccaccgacccgggggccacc
gatctggcggcggcgttgcgcgagcagatcgagctgcacacccagtggtggccggtcgag
gtcgcccccgccgatctcgccgaggcgttgctgccgatgcaggacacgccgttggggccg
ctggccgacgcactcacgctgcgccagatcgggttgacggaccggttgtgcgagttggac
ttcgagatccccctgatgggcggggacggggcggtctccccggagctgcggttggccgat
ctcgctgtgctgctgcgcgagcatctgcccgagtccgacccgttcgccggctacgccgac
cggttggcctccgaggccctcggcggccagtcgctgcgcgggtatttgtccgggtcgatc
gacgtggtgctgcgcttgccggaccaccgctatctggtggtcgactacaagaccaactac
ctcggcgattcggccgccgactacggcaccgcggcgctgatcgaggcgatgctgcactcg
gactacccgctgcaggcgctgctgtatgcggcggtgctgcaccggtttctgcggtggcgc
cagcccggctacgatccgcagcgccacctcggcggggtgctgtatctgttcgtgcgcggc
atgtgcggacccgacacgccgctcgtcgacgaccagccgaccggggtgttgagctggcgg
cccccggcggcgctggtcgtggcgctctcggagttgttgcagcacggacggggtcggcca
tga
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