Methylocystis parvus: F7D14_09215
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Entry
F7D14_09215 CDS
T06304
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpar
Methylocystis parvus
Pathway
mpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F7D14_09215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpar03019
]
F7D14_09215
03009 Ribosome biogenesis [BR:
mpar03009
]
F7D14_09215
Enzymes [BR:
mpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F7D14_09215
Messenger RNA biogenesis [BR:
mpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F7D14_09215
Ribosome biogenesis [BR:
mpar03009
]
Prokaryotic type
rRNA helicases
F7D14_09215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QGM97623
UniProt:
A0A6B8M8G6
LinkDB
All DBs
Position
complement(1959841..1961661)
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AA seq
606 aa
AA seq
DB search
MTFFNAGAPLARALSERDYTTPTAVQSAVLAHQSDSDILVSAQTGSGKTVAYGLAIAPTI
LGDREKLGAPGAPGALIIAPTRELALQVERELQWLYHYAEARIVACVGGMDARLERRKLS
EGAHIVVGTPGRLRDHIERGGLVPQKLKAVVLDEADEMLDLGFREDLEFILDATPPERRT
LLFSATMPKGIAALARRYQRDARRIDVAGGERGHADIDYRAIRVAPNEIEHATVNLLRYF
DAQTAIVFCNTRESVRHLHATLVERGFAAVLLSGELSQHERNHSMQALRDGRAGVCVATD
VAARGIDLPNLGLVIHADLPHDAEALQHRSGRTGRAGRKGVSALLVPAMRARRTERLLAE
AGVEALWSGPPLAEEIRKLDQQRMLQDPLLLEPPSEDDLALGRIVLAERQPEEIAAALVR
LYRSRLPAIEDVADPGETREFRPRRESARSERAVREPGKAPRAMSLSGAAVWFRLDIGRS
KNADPKWLLPMLCRKANITRDDIGTIRIFDQDTRVQIAESAADDFAANMRRPGGDNIRVE
RLAGEGAFGTKGPRARDRNDRPPRQEAGPSKSFPPRERRAKDQGPRQGKGAGKGKGSGKG
KRARPA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgacctttttcaacgccggcgccccgctggcccgcgcgctctccgagcgcgactatacg
acgccgacagccgtgcagtcggccgtccttgcccaccaatccgacagcgacattctcgtt
tcggcgcagaccggctccggcaagaccgtggcctatggcctcgccatcgcgccgacgatt
ctgggagaccgggagaaactgggcgcgcccggcgcccccggcgcgctgatcatcgcgccg
acgcgcgaactcgccttgcaggtcgagcgcgaactgcaatggctctatcattacgcggaa
gcgcgcatcgtcgcctgcgtcggcggcatggatgcgcgcctcgagcggcgcaaactgtcg
gagggcgcgcatatcgtcgtcggcacgccggggcgcctgcgggaccatattgagcgcggc
gggctcgtcccgcaaaaactcaaggccgtcgtgctcgacgaggccgacgagatgctcgat
ctcggttttcgcgaagacctcgaattcattctcgacgcgacgccgcccgagcgccgcact
ttgctcttttcggccaccatgccgaaaggcatcgcggcgctcgccaggcgctatcagcgc
gatgcgcggcgcatcgacgtcgccggcggcgagcgcggccacgccgatatcgactatcgc
gccattcgcgtggcgccgaacgaaatcgagcacgcgaccgtcaatctgcttcgctatttc
gacgcgcagacggcgatcgtcttctgcaatacgcgcgaatccgtgcgccacctccacgcc
acgctggtcgagcgcggcttcgcagccgtcctgctctcgggcgaactcagccagcatgag
cgcaatcattcgatgcaggccctgcgcgacgggcgcgccggcgtctgcgtcgcgaccgac
gtcgccgcgcgcggcatcgatctgcccaatctcggtctcgtgatccatgccgatctcccg
catgacgccgaggcgctgcagcatcgcagcggccgcaccggacgcgccggacgcaagggc
gtcagcgccctgctcgtgccggccatgcgggcgcgccgcaccgagcgcctgctcgccgaa
gccggcgtcgaggcgctatggagcggcccgccgctcgcggaagaaatccggaagctcgat
cagcagcgcatgctgcaagacccgctgctgctggagccgccgtcggaagacgacctcgcc
ctcggcaggatcgtgctcgccgaacgtcagccggaggagatcgccgccgcgctggtgcgg
ctctaccggtcgcgcctgccggcgatcgaggatgtcgccgatcccggcgagacgcgggaa
tttcgtccgcgcagggaaagcgcgcggtccgaacgcgcggtccgcgagcccggaaaggcg
ccgcgcgccatgagcctttcgggcgcggcggtatggtttcgcctcgatatcggccgctcg
aaaaacgccgatccgaaatggcttctgcccatgctgtgccgcaaggccaatatcacgcgc
gacgatatcgggacgatccgcattttcgatcaggacacgcgcgtgcagatcgccgaaagc
gccgccgatgatttcgccgcgaatatgcgccgtcccggcggcgacaatataagggtcgaa
cggctggcgggcgaaggcgccttcgggacgaaagggccgcgcgccagggaccgcaacgat
cgcccgccaagacaggaggcgggaccttcgaaatcgttcccgccgcgcgagcgccgggcc
aaagatcaaggcccgcgtcagggtaaaggagcgggcaaaggaaaaggatcgggaaaaggc
aagcgcgcccggccggcttga
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