Methylocystis parvus: F7D14_16255
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Entry
F7D14_16255 CDS
T06304
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mpar
Methylocystis parvus
Pathway
mpar03410
Base excision repair
mpar03430
Mismatch repair
mpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F7D14_16255 (recJ)
03430 Mismatch repair
F7D14_16255 (recJ)
03440 Homologous recombination
F7D14_16255 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpar03400
]
F7D14_16255 (recJ)
DNA repair and recombination proteins [BR:
mpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
F7D14_16255 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F7D14_16255 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
F7D14_16255 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
QGM98880
UniProt:
A0A6B8ME25
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All DBs
Position
complement(3409622..3411424)
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AA seq
600 aa
AA seq
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MNALFGGARAFLGVERSISGRPWRARLDASGEATALALAQAHGLDDLLARVLAGRGIGVA
EAKRYLDPTIRDLMPNPSTLTEMDAAVERLARAVETGEQIAIFGDYDVDGACSSALLIDY
WRAAGAPEPFLHIPDRIFEGYGPNSDAIRALAGRGATLLVTVDCGTVSHEPFAAAHELGL
DVIVLDHHQAPEALPAATIVNPNRQDDLSGQGALCAAGVVFLALAGLTRLLKTRGWFGDA
RPAPDLLAALDLVALATVADVAPLTGLNRAFVVKGLQVMRNRARIGLAALMDAARMDGPP
RVYHLGFALGPRINAGGRIGDAGLGARLLTLSDPTEARRISQELDRLNAERQGIEKRALE
EAIAQADMQFLKSNRLSCLVVEGSDWHPGVVGLIAARLKERFSIPSFAFAFNGETGSGSG
RSLSGVDLGKAVRRCVDLGLALKGGGHAMAAGVTLARGRLDEFRSYLNDALADAVDAARD
ADALVIDAAVSGRGVNIDLLRRVERAGPYGQGNPEPLFALPEQRLADAMVVGENHVRARL
RSGDGATVEAIAFRAIGSPIGDALLRGRGEVFHVAARVSANHFRGVERVETRIADLARVQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcactttttggcggggcccgcgcctttctcggcgtggagcgctccatatccgga
cggccctggcgggcgcggctcgacgcttcgggcgaagcgaccgcgctcgccttggcccag
gcgcatgggctcgacgaccttctcgccagagtcctcgccgggagagggatcggcgtggcg
gaggcgaagcgctatctcgatcccacgatccgcgatctgatgccgaacccttcgaccctc
accgagatggatgcggccgtcgagcggctggcccgcgcggtcgagacgggcgagcagatc
gcgatcttcggcgattacgacgtggatggcgcctgctcctcggcgctgctgatcgattat
tggcgggcggccggggcgccggagccctttctccatattcctgatcggattttcgagggc
tacggaccgaatagcgacgccatccgcgcattggccgggcggggcgccacgctgctcgtc
acggtcgattgcggcacggtcagtcacgagcctttcgcggcggcccacgagcttggtctc
gacgtcatcgtccttgatcatcatcaggcgcccgaggcgcttccggcggcgacgatcgtg
aacccgaaccggcaggacgacctctcgggccagggagcgctctgcgcggcgggggtggtc
tttctcgctttggcgggtctgacgcgccttttgaagacgcgcggctggttcggcgacgcg
cgtccggcgccggatcttctcgccgctctcgacctcgtcgctttggcgaccgtcgccgac
gtcgcgccgctgacggggctcaatcgcgcctttgtcgtgaagggccttcaggtcatgcgc
aaccgcgcgcgcatcggactcgccgccttgatggacgccgcccgaatggatgggccacca
cgcgtttatcacctcggcttcgcgctggggccgcgcatcaatgccggcggcaggatcggc
gacgccggtctcggcgcgcgtcttctgacgctttccgatccgaccgaggcgcgccgcatc
tcgcaggagctcgaccgtctcaacgccgaaaggcaggggatcgaaaagcgcgctttggag
gaggcgatcgcccaggcggatatgcagtttcttaagtcgaaccggttaagctgtctcgtg
gtggagggatcggactggcaccccggcgttgtgggcctgattgccgcgaggctcaaagaa
cgctttagtataccatcatttgcctttgcttttaatggagaaacaggatcaggttcaggt
agaagtttaagtggcgtcgaccttggtaaggccgttcggcgctgcgttgatctcggcctc
gcgctcaagggcggcggccacgccatggcggccggcgtcacgctcgcccgcggccggctg
gacgaattccggtcgtatctgaacgacgcgctggccgacgccgtcgacgcggcccgggat
gcggacgcccttgtcatcgacgccgccgtttcggggcgaggggttaatatcgatctcctg
cgccgggtggagcgggcgggaccgtacgggcagggaaacccggagccgttattcgccctg
ccggagcagcgtctcgccgacgccatggtcgtcggcgagaaccatgtgcgggcgcgtctg
cgctccggcgacggcgccacggtggaggccatcgctttccgggcgatcgggtcgcccatc
ggcgacgctctattgcgtggacggggcgaggtcttccacgtcgccgctcgcgtctccgcc
aatcacttccgcggcgtcgagcgggtagaaacccgcatcgccgatctcgcgcgggtccaa
tag
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