Methylocystis parvus: F7D14_20590
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Entry
F7D14_20590 CDS
T06304
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mpar
Methylocystis parvus
Brite
KEGG Orthology (KO) [BR:
mpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpar03400
]
F7D14_20590
Enzymes [BR:
mpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F7D14_20590
DNA repair and recombination proteins [BR:
mpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
F7D14_20590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
LppA
Dna2
Motif
Other DBs
NCBI-ProteinID:
QGM99981
UniProt:
A0A6B8MB88
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All DBs
Position
unnamed1:222231..224840
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AA seq
869 aa
AA seq
DB search
MDLVFSWFADGDAWPEHPGAGSAVLDQAVVGPLRLLDHVETMLGLGGPQVAMVERIAIYK
RKIEAAGADRFWSKSFGLDPWSSTRELLSWRDELIEAGWRPGIRLERTRLADIAAAEGVG
PALPPGVADRVRAVIDALEEKPTLSLESINLVDGRNLFPNGWRAMLDGLERCGVCIEQLT
APAPASLGDGRLTLLVADTELVAAEALAAWLAAAPENNDGLVFVLGRDTALLDHALAKAG
LPRLGHSTPSPHRSLLQILPLAFALAWEPPDPKRLLDFLLLPLGPLPRSVANKLADVVAE
SPGIGGEDWIAGWVEIEKTLAEEEGADAKKNAARLSEWRGFVEPKRHDPKKGMPRAAARR
IAEKVSSWAVKRAVSSDDPLFYALAQTAADLAAAIDAIETDTLDRLLLERMLEQAIGVGV
ADPSAVAEAAPWRSVQHPGAVWGEARTIVWWHFADMGEAGYSTVWNVLERDALAKGGCPL
DEPELAPQRLAAAWERPLRHGREKIVLVRPALAAGAETSAHPLWHSLVAQRPSLEEEISA
RAEAVLLDRNPTLAGRKLVRAPVALVSPPAPRLEWMAPAHAISARSLESATSLASLLACP
LQWTLRYAGKLYPGVRQSLPNMDTLVGTLAHRIAQEIFHPGDPPAPEAAEAKAATLLDEL
LPRIAATLLLPGASGELAAARSAVPQALAELARFLRSGKLSVVGVEYGFSVPDTLATCAG
VNGRIDLLTKTAEERLVVIDLKWQRSESWRRAELKNGVALQLSVYARHVSDENVDAATGY
FMLRQRRFLTATPLRGEGTTTVIDGPTPKDTWDRVVASWTSAMSDIEAGTVRALFDQSDT
KLEDFTDRYLLVPPKCGYCDYAGLCEVNS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgtcttctcatggtttgccgacggcgacgcatggccggagcacccgggcgcc
gggagcgccgtcctcgaccaagcggtcgtcggtccactgcgcctgctcgaccatgttgag
acaatgctcggcctgggcgggccgcaggtcgccatggtcgagcggatcgcgatttacaaa
aggaagatagaggcagcgggcgcggataggttctggtcaaagtcgttcggactcgatcct
tggtcgtccacacgtgagctgctgagctggagggacgaactgatcgaagccggatggcgc
cctggcatcaggctcgagcgcacgcgtcttgccgacatcgccgctgctgaaggagttggt
cctgctctgccgcccggagtcgccgaccgagtgcgcgccgtcatcgacgcgctcgaggag
aagccgacgctttcgttggaatcgatcaacctcgttgacggtcgaaatctcttccccaac
ggatggcgcgccatgctcgacgggctggagcgctgcggcgtctgcatcgagcaacttacc
gcgccagcgccggcttcgttgggtgatggccgactgacgctcctcgtcgcggacacggaa
ctcgtcgctgcggaggcgctcgctgcatggctcgctgctgcgccggaaaataacgacgga
ttggtcttcgttctcggtagggatacggccctgcttgatcacgcgcttgccaaggccggc
ctgccgcgtctcggccactcgacgccatcaccccatcggtcgcttctgcagatcctgccg
ctggccttcgccctcgcgtgggagccgccagatcccaaacggctgctcgatttccttctg
cttcccctcggtcccttgccgcgatccgtcgccaacaagctcgcggatgtcgttgccgag
tcgcccggtatagggggagaagactggatcgcggggtgggtcgagatcgagaagacgctg
gccgaagaggaaggcgcggacgccaaaaagaacgcggcgcgtctttccgaatggaggggt
ttcgtcgaaccgaagcgacacgatcccaagaaggggatgccacgcgccgccgcgcgcagg
atcgcggagaaggtttcctcatgggccgtcaagcgagccgtctcgtccgacgatccactg
ttctatgcgctcgcgcagacagccgccgacctcgccgcggcgatcgacgccatcgagacc
gacacgctcgaccgtctgctgctcgagcgcatgctcgaacaggccatcggcgtcggcgtg
gccgatccctcagcggtcgcggaggctgccccatggcggtcggtccagcatccgggggcg
gtttggggtgaagcgagaacaatcgtctggtggcatttcgcggacatgggggaagctggt
tacagcacggtctggaacgtgctggagcgcgacgccctcgccaaaggcggctgtcccctg
gacgagccggaactcgcaccgcagcggctggcggccgcgtgggagcgcccgttgcggcac
gggcgagagaagatcgtcctcgtccgcccggcgcttgccgccggggccgagacgagcgcg
catcccctctggcattcgctggtcgcacaacgaccctcccttgaagaggagatctccgcc
cgcgccgaggctgtccttttggatcgcaatccgacgcttgctggccggaagctcgtccgc
gccccggtcgcgcttgtctcgccgcccgcgccaagattggaatggatggcgcccgcgcac
gccatcagcgcgagatcgctcgagtccgcgacgtcgctcgcctcactgctcgcctgccct
ttgcagtggacgctaagatatgcgggcaagctctaccccggcgtccggcaatcgttgccg
aacatggacactcttgtgggcacgctcgcgcaccggatcgcgcaggaaatattccacccc
ggcgaccctccggcccccgaggcggccgaagccaaggccgccacactcttggatgaattg
ctgccgcggatcgccgcgacgttgctgttgcccggcgcttcgggcgaactcgctgccgcg
aggagcgcggttccccaggcgctcgcggaactcgctcgcttccttcgatcggggaagctg
agcgttgtcggtgtcgaatacggcttctcggttcccgacacgctcgccacctgcgctggc
gtgaacggtcgcatcgacctcttgacgaaaacggcggaggagcgcctcgtcgtgatcgac
cttaaatggcagcgtagcgaaagctggcggcgcgccgaactgaagaacggagtcgctttg
caactgtccgtctacgcccgccacgtctccgacgaaaatgtcgacgcggcgacgggatat
ttcatgcttcgccaacggcgttttctgaccgcaacgccgcttcgcggcgaagggacgacg
acggtgatcgatggcccgacgcccaaagacacatgggaccgggtcgtcgcctcatggacg
tccgcgatgtcggatatcgaagccggcacggttcgagcgctattcgatcaaagtgacacg
aagctcgaagacttcaccgatcgctatctcttggtcccgccaaaatgcgggtactgcgat
tacgcgggcctttgcgaggtgaactcatga
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