Methyloradius palustris: ZMTM_13950
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Entry
ZMTM_13950 CDS
T07445
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mpau
Methyloradius palustris
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpau03021
]
ZMTM_13950
Transcription machinery [BR:
mpau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ZMTM_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
BCM25136
UniProt:
A0A8D5JR57
LinkDB
All DBs
Position
1500173..1500736
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AA seq
187 aa
AA seq
DB search
MAQENSSPAYLAELLSKVGLGDRAAFSSLYQATSAKLFGLALRILLRRDLAEEALQDAFV
KIWHNAESFNPEKAAAMTWMTTIVRNRCLDVLRASPHEAQLAEEQSFDDWASEDLGPLAE
ITASTEAKALMNCMSHLAPLQRQTIAMSYFHGLAHEQLAQQLVQPLGTIKTWIRRGLQVL
KNCLTTA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagaaaattcatcccctgcttatcttgccgaactactttctaaagtgggtttg
ggagatcgcgccgcttttagttcactttatcaagcaacatccgcgaaactatttggcctc
gccttacgtatattgcttagaagagatttggcagaagaagctttgcaagatgcatttgtc
aaaatttggcataacgcagaaagctttaaccctgaaaaagctgctgccatgacttggatg
acaaccattgtgcgcaatcgctgtttggatgtattacgggcatcaccgcatgaagcgcaa
ctagcagaagagcagagttttgatgattgggcgtctgaagacttaggcccacttgcagaa
ataacagcatcaactgaagcaaaggcattaatgaactgcatgagccacttagcaccatta
caacgccaaaccattgctatgagctactttcatggcttggcgcatgagcaattggcacag
cagctggttcaaccactaggtacgatcaaaacctggattaggcgtggcctgcaagtgcta
aaaaactgcctgacaacggcataa
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