Marinomonas posidonica: Mar181_3040
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Entry
Mar181_3040 CDS
T01508
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mpc
Marinomonas posidonica
Pathway
mpc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mar181_3040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_3040
Enzymes [BR:
mpc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Mar181_3040
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Mar181_3040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEF56067
UniProt:
F6D1H8
LinkDB
All DBs
Position
3356153..3356929
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AA seq
258 aa
AA seq
DB search
MKVISLNVNGIKQAADRGFFEWMVRQNPDVVCLQDIQVDERSLNDSVFFPPEYNTYFFDS
MENPDQAGVAIYCKSMPKAIMTGMGFPECDFEGRFIQADFDKVSIGAFLTPHGSNHEETL
QEHKYRFMEGFKNHLIKTRRKRREFIFCGTANVARSPIDVSSWFVNQRNSGFLPEERKWI
NEIFNELEYIDAFRQVNKQDKQYTWWPDYERAWKLDEGGRLDYQIATPGLKNLIQGGTIY
KGQRFSDHAPLIMEYNLD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcatcagccttaatgtaaacggtataaaacaagcagccgatcgcggctttttt
gaatggatggttcgtcagaacccagatgttgtgtgtctacaagacatacaggtcgatgaa
cgcagcctaaatgacagcgttttctttccacctgaatacaacacgtatttctttgattcg
atggaaaaccctgatcaagcgggcgttgccatctattgtaagagcatgccaaaggccatt
atgactggcatgggtttccctgaatgtgactttgaaggtcgcttcattcaagcggatttt
gacaaggtcagtattggtgcttttttaacaccacatggatcgaatcatgaagaaacccta
caagagcataaatatcgctttatggaaggctttaagaaccatttgattaaaacccgccgt
aagcgccgcgaatttattttttgcggcaccgcgaatgtggctcgctctccgatcgacgtc
agtagctggtttgtgaatcagcgaaattctggtttcttaccagaagagcgcaaatggatt
aatgaaatcttcaacgagctggaatacatcgatgctttccgtcaggtaaataagcaagat
aaacaatacacttggtggcctgactacgagcgcgcttggaaattggacgaaggtggtcgt
ttggattatcaaatcgccacaccaggcctgaaaaacttgatccaaggtggcacaatctac
aaaggtcagcgtttctctgaccatgcgccattgattatggaatacaacttagactaa
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