Marinomonas posidonica: Mar181_3226
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Entry
Mar181_3226 CDS
T01508
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mpc
Marinomonas posidonica
Pathway
mpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mar181_3226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_3226
Enzymes [BR:
mpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mar181_3226
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mar181_3226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
AAA_30
zinc-ribbons_6
AAA_22
AAA_11
AAA_19
cobW
RPN1_C
Motif
Other DBs
NCBI-ProteinID:
AEF56249
UniProt:
F6CT83
LinkDB
All DBs
Position
3548310..3550541
Genome browser
AA seq
743 aa
AA seq
DB search
MQEALLTQHPYIKVALPVPLRTLFDYKVPKAIALRHELTPGMRVKVPFGKSSRLGVIVAL
SETSDWNPDDVKPLTSLHDKQPVITPELMALCEWAARYYHHPIGDVVFHALPVLLRKGEN
AEFRTENWWFTTTAGQAFEIEQLSRAPRQQDFLKAVQQHPNGLSQQAASVLDLAPAAGKS
LEEKGLLRREPRAFNKAGEKHTHQTQVPPTLNLEQASAIDALLDHRHHFHVSLLDGVTGS
GKTEVFLRLIEQCIKEDKQVLVMVPEIGLTPQTLKRFEVRFNTDIVLMHSNMNDRERLDA
WLLAANGHAKIIIGTRSAVFVPAPKLGLMVIDEEHDASYKQHEKFRYHARDLAMKRAQSL
NIPVLLASATPSYESLTNALQKRFSWLKLRQRAGDAHIPKMERVDLRGQTLVHGLSETAL
TNMKLTLERKEQVLIFLNRRGYAPTLMCHQCGWIATCDHCDVNLTVHKRANKLHCHHCDS
QKALIHQCPDCQSEELFTVGEGTEQLETQLNTLFKDTPILRIDRDSTQRKSAMTKLTQKI
HEHDQAILIGTQMLAKGHHFPNVTLVIIMDADAGLFSSDFRGMERTAQLITQVSGRAGRA
KKPGHVLLQTYHPDHAAIECLCNLGYEHFAMNGLAERKSLSLPPFYHQVIVRAESTSEQE
AMQLLNALKNDLTPMLPPDVHMVGPYAAIIVRKAGQHRALISIKSAHRAPLHQVTERMTQ
WLEQATKQHKIRFAIDVDPLETY
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggctctacttactcagcacccttatattaaagtcgccctgccagtgccgctg
cggaccttattcgactataaagtgccaaaagccattgccttacgtcatgaattaacgcct
ggtatgcgagtcaaagtgccatttggaaaaagcagccgtttaggcgtcattgtcgcactc
agtgagaccagtgactggaacccagatgacgtcaaacctcttacttcactgcacgataaa
caaccggtcattaccccggaactgatggcgctctgcgagtgggcggcacgttattatcat
cacccaataggcgatgtcgtttttcatgcgttacccgtgttattgcgcaaaggtgaaaat
gcggaatttcgcactgaaaattggtggtttaccacaacagcaggtcaagcattcgagatc
gagcagttaagccgtgcaccacgtcagcaggattttttaaaagccgttcaacaacaccca
aatggcctaagtcaacaagccgcgtcggtactggatctggcgcccgctgcgggcaaaagt
ctcgaagaaaaaggcctattgcgccgggagccaagagcctttaataaagcgggggaaaaa
cacactcaccagactcaggtccctccgacgctcaatttagaacaggcttcagcgatcgat
gctttgctcgatcaccgccatcacttccacgtgtctttattggacggtgttactggcagt
ggtaagacagaagtttttttacgtttaatagagcaatgcatcaaagaagacaaacaagtg
ttggtcatggtgccagagattggcttaacccctcaaaccctaaaacgtttcgaagtacgt
tttaataccgacattgttctcatgcactccaatatgaatgacagagaacgcctagatgcc
tggctgctcgccgctaacggtcatgcaaaaatcatcataggcactcgctctgccgtcttt
gttcctgcgccaaaacttggtctcatggtcatcgacgaagaacatgatgcctcttataaa
caacacgaaaaatttcgttaccatgctcgcgacctcgccatgaaacgggcgcaaagtctg
aacattccagtcctactggcgtctgcgacaccctcttacgaaagtttaaccaacgcccta
caaaagcgattctcttggctcaaattgcgccaacgggctggggatgctcatatccccaaa
atggaaagagttgatttacgaggccaaaccctcgttcatggtttgagcgaaaccgcgctg
accaacatgaagcttaccttagagcgcaaagaacaagttttaatctttttgaatcgtcgt
ggttatgctccaacactgatgtgccatcaatgtggctggattgcgacctgtgatcattgt
gatgtcaatctcacagtgcacaaacgtgcaaacaagctgcattgccaccattgtgattcg
caaaaagccctgattcatcaatgcccagattgtcaaagcgaagaattatttacggttgga
gaaggcacagagcagctagaaacccagctcaatacgctgtttaaagacactcccatttta
cgcattgatcgagacagcacccaacgtaaatcagccatgaccaagctcacacaaaagatc
cacgaacatgatcaagccattttaattggcacccaaatgttggccaaaggccaccatttt
ccgaatgtcaccttggtcatcatcatggacgcagatgcgggattattttcatccgatttt
cgcggcatggagcgcaccgcgcaacttatcacccaagtatcagggcgagccggaagggcg
aaaaaaccaggccatgtattgttgcaaacctatcatcctgaccacgccgcgattgaatgc
ttatgcaacctaggttatgagcacttcgcaatgaatggactggctgaacgcaaatccctc
tctttaccgccgttttaccaccaagtgattgttcgagcagaatccaccagcgaacaagaa
gccatgcaactattaaatgccctgaaaaacgacctaacccctatgctgccaccggacgtt
catatggtgggtccttatgctgccatcatcgttcgcaaagcgggacagcaccgagccttg
atttcaattaagtcggctcatagggcaccgttacaccaagtcactgaaaggatgacgcaa
tggttagaacaggcgaccaaacaacataaaattcgtttcgcaatcgacgttgacccactg
gaaacttattaa
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