Methylophaga pinxianii: LGT42_005555
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Entry
LGT42_005555 CDS
T08312
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
mpin
Methylophaga pinxianii
Pathway
mpin03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LGT42_005555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpin03400
]
LGT42_005555
DNA repair and recombination proteins [BR:
mpin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LGT42_005555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
PIN_2
Motif
Other DBs
NCBI-ProteinID:
UPH46750
LinkDB
All DBs
Position
1142097..1142927
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AA seq
276 aa
AA seq
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MALRAYWKGHIRLSLVSFPVRLHAAITSSEKISLHQYDKETGDRIRYQKVDESGDEVVGE
DIIRGYEYEKGSYVPIEDEDLDKLKLESKHTIELVQFTDIDDVDPIYFEKSYYVVPEGEI
AEEAFLTVREALKSSKKAAIGQVVLNKKERIVCLRPCCNGMIMDTLRYDYEVRESQRYFE
DIPKKAKINKEQLELAKQLIEQKTQPFDPKAFKDNYQQGLLDIIEAKLKGKKVTTSGKKP
QADNVVNIVDALKKSLEQSQKSKKPRKKSTSKSKAS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggctctacgcgcatattggaaaggacatatccgtctctcactggtttcgttcccggtc
agattgcatgcggctataaccagtagcgaaaagatttcactgcatcagtatgataaagaa
acgggtgatcgtatccgctatcagaaagtcgatgaaagcggtgatgaggtggttggagaa
gacattatccgaggttacgagtacgagaaggggagttatgttccaatcgaggatgaggat
ctggacaagctgaagctggaaagtaagcacactattgaactggtgcagttcacggatatt
gatgatgtcgatccgatatattttgaaaaatcctactatgtggtaccagaaggcgagata
gctgaagaggctttccttaccgtccgcgaagcgcttaagtcctctaaaaaagctgcaatt
gggcaggtggtgttgaacaaaaaagagcgcattgtctgtttacgcccatgctgcaatggc
atgattatggatacgctgagatacgattatgaagtacgcgaatcacagcgttactttgaa
gacatccctaaaaaagccaagattaataaagagcagcttgaactcgctaaacaattaatt
gaacagaaaacccaaccttttgatccaaaggcttttaaagataattatcagcaagggttg
ctggatattattgaagccaaattgaagggtaaaaaagtcaccacctcaggtaaaaaacca
caagccgataatgtcgtgaatattgtggatgccctgaaaaaaagccttgaacaaagtcaa
aaaagtaaaaaaccgagaaagaaatcgacttcaaaatctaaagcctcgtaa
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