Marinobacter psychrophilus: ABA45_06725
Help
Entry
ABA45_06725 CDS
T03980
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mpq
Marinobacter psychrophilus
Brite
KEGG Orthology (KO) [BR:
mpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpq03021
]
ABA45_06725
Transcription machinery [BR:
mpq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABA45_06725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
7TMR-DISMED2
DUF4168
Motif
Other DBs
NCBI-ProteinID:
AKO52153
UniProt:
A0A0H4I311
LinkDB
All DBs
Position
1517634..1518635
Genome browser
AA seq
333 aa
AA seq
DB search
MSQYQEDLIVDRVEQSEDAEKKKPKSGDTASPRKVTNKTTAKPAGRPASSRYYSSSKQLD
ATQLYLNEIGFSPLLTPEEEVYFARLARKGEEAGRKRMIESNLRLVVKIARRYVNRGLTL
LDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERGIMNQTRTIRLPIHVVKELN
LYLRAARELTQQLDHEPTAEEIARKVDKPVKDVKRMLGLNERVASMDTPIGAGGEKSLLD
TVADEGASDPADVLQDNNISVCLQQWIDQLSEKQQEVLARRFGLRGYPISTLEEVGQEIG
LTRERVRQIQVEALRRLREILEKEGLTGNLLFQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatatcaggaagacttgattgtcgatcgcgtcgagcagtccgaagacgctgaa
aagaagaaaccaaaatccggagatacagcctcaccgcgcaaggttaccaacaaaacaacc
gcgaaacctgctggtcgtccggcgagcagtcgttattacagcagcagcaagcagctggat
gccacacagctttacctcaacgaaataggcttttcgccgctgcttacccctgaagaagaa
gtatactttgcacgcctggcccgaaaaggcgaggaagcaggtcgtaaacgcatgatcgaa
agcaacttgcggctggttgtaaaaatcgcccggcgctatgtgaatcgcggtttgactctg
ttggatctgatcgaagaaggtaaccttggtttgattcgcgcggttgagaagtttgatcca
gagcgcgggtttcgcttctctacctatgccacctggtggattcgccaaaccatcgaacgc
ggtatcatgaaccagacccgcactattcgcttgcccattcacgtggtgaaagaactcaac
ctttatctgcgggcggcccgcgagctgacccagcaactagaccacgaacccacagctgaa
gaaattgctcgtaaggtcgacaaaccggtcaaagatgttaaacgcatgcttgggttgaac
gagcgcgttgcttccatggacacgccgattggcgccggtggtgaaaaatcccttctggat
acggtagccgacgaaggcgcatcagatcccgccgacgtactgcaggacaacaacatttcg
gtttgcctgcaacagtggattgaccaacttagcgaaaaacagcaggaagtgctggcgcgc
cgttttggtttgcgtggctatcctattagtacgctagaagaagttgggcaagaaattgga
ctgacccgagaacgagtgcgccagatccaagtggaagctctacgtaggctgcgcgagata
ttggaaaaagaaggactaactggaaatcttttatttcagtag
DBGET
integrated database retrieval system
