Marichromatium purpuratum: MARPU_12370
Help
Entry
MARPU_12370 CDS
T03650
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpur
Marichromatium purpuratum
Pathway
mpur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARPU_12370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpur03019
]
MARPU_12370
03400 DNA repair and recombination proteins [BR:
mpur03400
]
MARPU_12370
Enzymes [BR:
mpur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MARPU_12370
Messenger RNA biogenesis [BR:
mpur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARPU_12370
DNA repair and recombination proteins [BR:
mpur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MARPU_12370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
HTH_40
ResIII
GerE
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AHF04548
UniProt:
W0E4R5
LinkDB
All DBs
Position
2794476..2796662
Genome browser
AA seq
728 aa
AA seq
DB search
MQETPLQILNRVFGYERFRGDQAKIIDRLLDGDDALVLMPTGGGKSLCYQIPALLRPGTA
IVVSPLIALMQDQVDALRQLGVAAAYLNSSLDPEAAQDVEQALRAGTLDLLYVAPERLLT
ERFLALLGEARIALFAIDEAHCVSQWGHDFRPEYIQLGLLHARWPEVPRIALTATADAPT
RAEIVSRLGLERAHQFVSSFDRPNIRYRVVEKASPRQQLLDFLRREHPQDAGIVYCLSRK
RVEETAAFLAAEGFTALPYHAGLAAEQRRAHQARFLRDEGVVMVATIAFGMGIDKPDVRF
VAHLDLPKSLESYYQETGRAGRDGLPADAWMTYGIGDLVTLRRIIEDSEADERFKRIERQ
KLDGMLGYCETIACRRQVLLEYFGEHLAEPCGNCDTCLEPVATWDGTEAARKALSCIYRT
GQRFGSAYLTDVLLGKDHERIRRFGHDRVSTHGIGQELGAAQWRSVYRQLVAAGLVEVDH
QGHGALRLTERSRPLLRGEARIELRRDPEPRRAQRARQGAVETAPRDAEAQALWEALRGH
RRELAQANNVPAYVIFNDVTLQELLAHRPRDLDELARISGLGEAKLERFGAGLLAVLEAH
AAEHGRPAGTAAPPPRATPRPRAPRGLGDSERETLTLARTGADVATIAARRGLKPRTIHG
HLARAVAAGELDAATATGLDAASLKRIETAFAALPENAISPLRALHEALGGEFDYGVLQC
VRAALERD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagagacacccctgcagatcctcaaccgcgtcttcggctacgagcgcttccgcggc
gaccaggccaagatcatcgaccgcctgctcgacggcgacgatgcgctggtactgatgccc
accggcggcggcaagtcgctgtgctaccagatcccggcgctgctgcgccccggcaccgcc
atcgtggtctcgccgctgatcgcgttgatgcaggatcaggtcgacgcgctgcgccagctc
ggcgtcgccgccgcctatctcaattcatccctcgacccggaggcggcgcaggacgtcgag
caggcgttgcgcgcgggcaccctggatctgctctacgtcgcccccgaacggctgctcacc
gagcgcttcctcgctctgctcggcgaggcgcgcatcgcgctcttcgccatcgacgaggcg
cactgcgtctcgcagtgggggcacgacttccgccccgagtacatccagctcgggctgctc
cacgcgcgctggcccgaggtgccgcgcatcgccctcaccgccaccgccgatgcgcccacc
cgcgccgagatcgtctcgcgcctggggttggagcgggcacaccagttcgtctccagcttc
gaccgcccgaacatccgctaccgagtggtggagaaggccagcccgcgccagcagctgctc
gacttcctccgccgcgagcacccccaggacgccggcatcgtctactgtctgtcgcgcaag
cgcgtcgaggagaccgccgccttcctcgccgccgagggcttcaccgccctgccctatcac
gccgggctcgccgccgagcagcgccgcgcccatcaggcccgtttcctgcgcgatgagggg
gtggtgatggtcgccaccatcgccttcggcatgggcatcgacaagcccgacgtgcgcttc
gtcgcccatctcgacctgcccaagagcctcgagtcctactaccaggagaccggccgcgcc
gggcgcgacggcctgcccgccgacgcctggatgacctacggcatcggcgacctggtcacc
ctcagacggatcatcgaggactccgaggccgacgaacgcttcaagcgcatcgagcgacag
aagctcgacggcatgctcggctactgcgagaccatcgcctgtcgccgtcaggtgctgctc
gagtacttcggcgagcacctcgccgagccctgcggcaactgcgacacctgtctcgagccg
gtcgccacctgggacggcaccgaggccgcgcgcaaggcgctttcgtgcatctatcgcacc
ggccagcgcttcggcagcgcctatctcaccgacgtgctgctcggcaaggaccacgagcgc
atccgccgcttcggtcacgaccgggtgagtacccacggcatcggccaggaactcggcgcc
gcgcagtggcgctcggtctatcgccagctggtcgccgccgggctggtcgaggtcgaccac
cagggccacggcgcgctgcgcctcaccgagcgcagccgcccgctgctgcgcggcgaggcc
cgcatcgagctgcgccgcgaccccgagccgcgacgcgcccagcgcgcccgccaaggcgcc
gtcgagaccgcgccgcgcgacgccgaggcccaggcgctgtgggaggcgctgcgcggccat
cggcgcgagctggcccaggccaacaacgtcccggcctatgtgatcttcaacgacgtcacc
ctgcaggagctgctcgcccaccgcccgcgcgatctcgacgaactcgcgcgcatcagcggg
ctcggcgaggccaagctcgaacgcttcggcgccggactgctcgccgtgctcgaggcccac
gccgccgagcacggccgccccgcgggcaccgccgcgccgccaccgcgcgccaccccccgg
ccccgcgcgccgcgtgggctcggcgacagcgagcgcgagaccctgacgctggcgcgcacc
ggcgccgatgtcgccaccatcgccgcgcgccgcggtctcaaaccgcgcaccatccacggt
catctcgcccgcgcggtggccgccggcgagctcgacgcggccaccgccaccgggctcgac
gccgccagcctgaagcgcatcgagacggccttcgccgcgctgcccgagaacgccatcagc
ccgctgcgcgcgctccacgaggccctcggcggtgagttcgactacggcgtgctacagtgc
gtgcgcgccgccctggagcgtgattga
DBGET
integrated database retrieval system
