Methanolobus psychrophilus: Mpsy_2162
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Entry
Mpsy_2162 CDS
T02280
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mpy
Methanolobus psychrophilus
Pathway
mpy03410
Base excision repair
mpy03430
Mismatch repair
mpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mpsy_2162
03430 Mismatch repair
Mpsy_2162
03440 Homologous recombination
Mpsy_2162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpy03400
]
Mpsy_2162
DNA repair and recombination proteins [BR:
mpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mpsy_2162
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mpsy_2162
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mpsy_2162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
B12-binding
SelA
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AFV24366
LinkDB
All DBs
Position
complement(2090788..2092170)
Genome browser
AA seq
460 aa
AA seq
DB search
MSDTMIQMAQRARRCAEEIKKHKEVQLVSHIDADGISSAAIIARSMERAGIEYEMLFVKQ
LDENIVRELANDNPELVIFTDLGSGQIEHINNYGLHAVVADHHRPQGDLEMHLNPHLFGA
NGSFEISGSGTAFLLAQQLGSNRDLADLAIVGCIGDMQYRKYGKLVSLNREILDNNPDII
TAKTDISLFGKQTRPVYKMLQYSSDPYLPGLTGNEDACINFLRKIGFRCAEDERWRRWID
LTEEEKIKVTSSLLQYSVQNGLSSYSVNRLVSECYILLQESEGTEMRDASEYATLLNATG
RYMKADIGMAVCMGDRGEAYEDSKKLLGEHRKNLVDGLNFVREKGVTQLSNLQYFDAGSS
IPETIVGIVAGMSHASNNRHLPIVAFADKEDGHKVSARGTQELVNKGLNLSEAISQVCQE
IGGAGGGHDIAAGATVPFGKKEEFIERLNALIARQIIGRA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccatgatacaaatggctcagcgtgccagaaggtgcgcagaggagataaag
aaacacaaagaagtgcaattggtgtcgcatatcgatgccgatgggataagttctgcggcc
atcattgccaggtcaatggaaagagctggtatcgagtatgagatgctttttgtgaagcag
cttgatgagaatatcgtcagggagcttgcaaacgataaccccgaacttgtgatatttaca
gaccttggcagcgggcagatagaacatattaacaattacggactgcatgcagtagttgct
gaccatcaccgtccgcagggagatctggaaatgcacctcaacccccatcttttcggggct
aatggttcctttgagatcagcggctcagggactgcattcctgcttgcgcagcagctggga
agtaacagggatcttgcagaccttgccatcgtaggatgtattggagatatgcaataccgt
aaatatggcaaactcgtaagtctcaaccgggagatacttgacaataatccggacatcata
acagcaaagacagatatatccctgttcggcaagcagacaaggcctgtctacaaaatgctg
cagtactcttcagatccttacctgccgggacttacaggcaatgaggatgcttgcataaat
tttctccggaagataggattccgctgtgcggaagatgagagatggcgcaggtggatagac
cttacagaggaagaaaaaataaaggtgacttcttccctccttcaatattcggtgcagaac
ggcctttcatcatacagtgtcaaccgcctggtcagcgagtgttacatactcctgcaggaa
agtgaaggaaccgaaatgagagacgccagcgaatatgccactctgcttaatgccactgga
cgatacatgaaagcagatatcggaatggctgtctgcatgggggacaggggagaggcgtat
gaggattcgaagaaactcctgggagagcaccgcaagaaccttgtggacggtcttaacttt
gtcagggaaaaaggagtgactcagttatcgaacctccaatacttcgatgcaggtagctcc
ataccggaaactattgtcgggatagttgcgggtatgagccacgcatccaacaaccggcat
ctccccatcgtagcatttgccgataaggaggacggacataaggtatctgcaagaggcaca
caggaacttgtgaacaaagggctcaacctttcagaagccatcagccaggtgtgccaggag
ataggaggcgccgggggagggcacgatattgctgcgggcgcaacagtaccttttggtaaa
aaagaagaattcattgagagactgaatgcgctcatagccaggcagataataggccgtgcc
tga
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