Microbacterium rhizosphaerae: SM116_05450
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Entry
SM116_05450 CDS
T09585
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
mrg
Microbacterium rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrg03000
]
SM116_05450
Transcription factors [BR:
mrg03000
]
Prokaryotic type
Helix-turn-helix
XRE family
SM116_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
Peptidase_M78
ScfRs
Motif
Other DBs
NCBI-ProteinID:
WPR90739
LinkDB
All DBs
Position
complement(1264793..1266235)
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AA seq
480 aa
AA seq
DB search
MTASGIELATLGHRIRHHRLESGMTLDELGAQVGVAGSHLSLIENGKREPKLSLLQEIAR
ATGVELADLLSTEPPNRRAALEIELERAQASTVFRRLGVTPVKVSKAMSDDTLESILGLH
RELHRREREAIATPEEARRANTELRLHMRERNNYLPEIERLAEKQLKSAGHVSGALTHRT
VSLMAEQLGFELIYVTDLPHSARSVTDIQNGRIYLPPASIPGGHGLRSMALQAMGHRMLG
HQPPTSYADFLQQRLEINYYAACCLMPETNAVAFLQQAKKDRNLAVEDFRDAFGVTHEAA
GMRMTNLLTHHLGIPLHFLRVDGTGAISRVYENDDLPLPMDVTGSVEGQMVCRKFLARSA
FEEQNRTTEHYQYTDTPAGSFWCSTQTGSTSSGEFSVTVGVPFDDAKWFRGRETQKRAVS
TCPDETCCRRPPTDAAARWDGKAWPSARVHMQMFSPLPSGKFPGVDATEVYAFLDRHAEG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctccggcatcgaactggccaccctgggccaccgcatccgtcaccaccgcctc
gagagcggcatgaccctggacgagctcggggcacaggtcggcgtcgcagggagccacctg
agcctcatcgagaacggcaagcgcgagccgaagctctcgctgctgcaggagatcgcgcgg
gccacgggggtggagctcgccgacctgctgtcgaccgagccgccgaaccgccgcgccgcc
ctggagatcgagctcgagcgggcgcaggcgagcacggtgttccggcgcctcggcgtcacg
ccggtgaaggtcagcaaggccatgagcgacgacacgctggagtccatcctcgggctgcac
cgcgagctgcaccgccgcgagcgcgaagccatcgccacaccggaggaggcgcgtcgcgcc
aacaccgagctgcggctgcacatgcgcgagcggaacaactacctgccggagatcgagcgg
ctcgcggagaagcagctgaagtcggccggccacgtgtcgggcgcgctcacgcaccgcacc
gtgagcctcatggccgagcagctcggcttcgagctcatctacgtcaccgatctcccccac
tccgcgcgatcggtcaccgacatccagaacgggcgcatctacctgccgccggcatccatc
cccggcgggcacggcctgcgctcgatggcgctgcaggcgatggggcaccggatgctcggc
caccagccgccgacgtcgtacgccgacttcctccagcagcggctcgagatcaactactac
gccgcgtgctgcctgatgcccgagaccaacgccgtggcgttcctgcagcaggcgaagaag
gaccgcaacctcgcggtcgaggatttccgcgacgcgttcggcgtcacgcacgaggcggcc
gggatgcggatgaccaacctgctgacgcaccacctcggcatccccctgcacttcttgcgg
gtggacgggacgggcgccatctcgcgcgtctacgagaacgacgacctgccgctgccgatg
gacgtcacgggctcggtcgagggtcagatggtgtgccgcaagttcctcgcgcgctcggcg
ttcgaggagcagaaccgcaccaccgagcactaccagtacaccgacacccccgccgggtcg
ttctggtgctcgacgcagaccggctcgacgagctccggcgagttctcggtcaccgtcggc
gttccgttcgacgacgcgaagtggttccgagggcgcgagacgcagaagcgcgcggtgtcg
acgtgcccggacgagacgtgctgccggcggccgccgacggatgccgcggcccgctgggac
ggcaaggcctggccgagcgcccgcgtgcacatgcagatgttctccccgctgccgagcggc
aagttccccggcgtcgacgcgacggaggtctacgccttcctcgaccggcacgccgagggc
tga
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